BUSCO Gene Details in Acropora cytherea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora cythereaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.7% [S: 67.8%, D: 12.9%] F: 10.9%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,586 (80.7%)2,172 (67.8%)414 (12.9%)349 (10.9%)268 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora cytherea: 3,438 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8407at6073Complete782.9347.0acyt_s0118.g44.t1Mitogen-activated kinase 1JBrowse
8414at6073Complete247.8158.0acyt_s0200.g9.t1class E basic helix-loop-helix protein 22 isoform X1JBrowse
8465at6073Duplicated705.7343.0acyt_s0078.g15.t2hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0acyt_s0078.g15.t1hepatocyte nuclear factor 4-gammaJBrowse
8477at6073Complete201.3135.0acyt_s0093.g40.t1uncharacterized protein LOC116295621JBrowse
8488at6073Fragmented284.3184.0acyt_s0006.g173.t1spermatogenesis-associated protein 17JBrowse
8515at6073Complete446.2247.0acyt_s0034.g105.t1ras-related protein Rab-36JBrowse
8529at6073Complete747.2456.0acyt_s0083.g18.t1ras association domain-containing protein 1JBrowse
8605at6073Fragmented1125.7617.0acyt_s0025.g159.t1Thioredoxin domain-containing 12JBrowse
8658at6073Complete675.6450.0acyt_s0040.g66.t1F-box only protein 47JBrowse
8674at6073Complete517.8282.0acyt_s0126.g50.t1Solute carrier family 25 member 51JBrowse
8715at6073Fragmented210.8110.0acyt_s0033.g85.t1AP-4 complex subunit sigma-1JBrowse
8718at6073Complete1727.3975.0acyt_s0020.g67.t1Ubiquitin conjugation factor E4 BJBrowse
8721at6073Complete891.9462.0acyt_s0195.g6.t1N-acetylgalactosamine kinaseJBrowse
8749at6073Complete1055.6741.0acyt_s0023.g104.t1epithelial discoidin domain-containing receptor 1JBrowse
8765at6073Complete649.1320.0acyt_s0011.g88.t1transaldolaseJBrowse
8767at6073Fragmented858.3440.0acyt_s0087.g98.t1importin-5JBrowse
8845at6073Complete880.8536.0acyt_s0005.g12.t1early growth response protein 1JBrowse
8864at6073Complete402.8261.0acyt_s0054.g26.t1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Complete481.4254.0acyt_s0006.g239.t1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
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