BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8721at6073Complete892.4462.0aint_s0560.g10.t1N-acetylgalactosamine kinaseJBrowse
8749at6073Duplicated898.5595.0aint_s0069.g9.t3epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated896.9595.0aint_s0069.g9.t2epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated896.6595.0aint_s0069.g9.t1epithelial discoidin domain-containing receptor 1JBrowse
8765at6073Complete652.0320.0aint_s0184.g59.t1transaldolaseJBrowse
8767at6073Complete2144.81088.0aint_s0070.g15.t1importin-5JBrowse
8845at6073Complete880.2536.0aint_s0001.g40.t1early growth response protein 1JBrowse
8864at6073Complete399.5261.0aint_s0029.g69.t1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Complete481.4254.0aint_s0032.g64.t1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8874at6073Complete569.4303.0aint_s0076.g6.t1regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Complete747.9398.0aint_s0619.g9.t2transcriptional enhancer factor TEF-1-likeJBrowse
8905at6073Complete579.2419.0aint_s0151.g24.t1protein naked cuticle homolog 2-likeJBrowse
8984at6073Complete879.1433.0aint_s0079.g33.t16-phosphofructo-2-kinase/fructose-2, 6-bisphosphataseJBrowse
9011at6073Fragmented1137.0661.0aint_s0026.g79.t1Coronin-7JBrowse
9020at6073Fragmented825.2410.0aint_s0239.g18.t1tRNA (guanine(26)-N(2))-dimethyltransferase-likeJBrowse
9037at6073Complete827.9450.0aint_s0326.g10.t1phosphatidate cytidylyltransferaseJBrowse
9061at6073Complete463.0272.0aint_s0280.g20.t1L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-likeJBrowse
9095at6073Fragmented365.6160.0aint_s3025.g1.t1Ubiquitin-conjugating enzyme E2 J2JBrowse
9109at6073Complete324.4186.0aint_s0272.g6.t1COMM domain-containing protein 1JBrowse
9117at6073Complete650.6362.0aint_s0368.g7.t1Protein Wnt-1JBrowse
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