BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5527at6073Complete284.7156.0XP_074618375.1protein SYS1 homologJBrowse
5560at6073Complete620.9361.0XP_074624350.1snRNA-activating protein complex subunit 3JBrowse
5616at6073Complete363.1190.0XP_074608253.1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5670at6073Complete406.8230.0XP_074616742.1MIT domain-containing protein 1JBrowse
5708at6073Complete650.2345.0XP_074615852.1ATPase family AAA domain-containing 1JBrowse
5718at6073Complete2024.8964.0XP_074629806.1Valine--tRNA ligaseJBrowse
5762at6073Complete546.9296.0XP_074639293.1ribonuclease H2 subunit AJBrowse
5972at6073Complete238.8257.0XP_074621105.1GRB2-associated-binding protein 1-likeJBrowse
5992at6073Complete512.1265.0XP_074606853.1adenylate kinaseJBrowse
6014at6073Complete702.9374.0XP_074623940.1uncharacterized protein LOC116304099JBrowse
6088at6073Complete942.7449.0XP_074638620.1casein kinase IJBrowse
6098at6073Complete302.0209.0XP_074612718.1homeobox protein Nkx-6.1JBrowse
6124at6073Duplicated348.5173.0XP_074617757.1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6124at6073Duplicated348.5173.0XP_074617758.1secretory immunoglobulin A-binding protein EsiB-likeJBrowse
6132at6073Complete300.2177.0XP_074633631.1tRNA-specific adenosine deaminase 2JBrowse
6185at6073Complete1010.6574.0XP_074637569.1replication protein A 70 kDa DNA-binding subunitJBrowse
6198at6073Duplicated1238.7854.0XP_074614502.1uncharacterized protein LOC114955792 isoform X1JBrowse
6198at6073Duplicated1235.8852.0XP_074614503.1uncharacterized protein LOC114955792 isoform X1JBrowse
6199at6073Complete955.2470.0XP_074622458.1citrate synthase, mitochondrial-likeJBrowse
6261at6073Duplicated700.4384.0XP_074629247.1SEC14 cytosolic factor-likeJBrowse
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