BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4972at6073Duplicated357.0223.0g18086.t1.1glyoxalase 3-likeJBrowse
5046at6073Duplicated503.3453.0BRAKERHOCP00005001503.1GPI mannosyltransferase 3JBrowse
5046at6073Duplicated503.3453.0g4676.t1.1GPI mannosyltransferase 3JBrowse
5057at6073Duplicated275.0141.0BRAKERHOCP00005017021.140S ribosomal protein S16JBrowse
5057at6073Duplicated275.0141.0g49.t1.140S ribosomal protein S16JBrowse
5063at6073Duplicated532.2302.0BRAKERHOCP00005017059.1mitoferrin-1JBrowse
5063at6073Duplicated532.2302.0g625.t1.1mitoferrin-1JBrowse
5121at6073Duplicated329.7183.0BRAKERHOCP00005009602.1GTP-binding protein RhebJBrowse
5121at6073Duplicated329.7183.0g13976.t1.1GTP-binding protein RhebJBrowse
5127at6073Fragmented339.9209.0BRAKERHOCP00005012375.1E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5132at6073Duplicated276.9317.0BRAKERHOCP00005008183.1pleckstrin-2-likeJBrowse
5132at6073Duplicated276.9317.0g2262.t1.1pleckstrin-2-likeJBrowse
5141at6073Fragmented830.2377.0BRAKERHOCP00005013422.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Duplicated1001.8508.0BRAKERHOCP00005020775.1WD40 repeat-containing SMU1JBrowse
5181at6073Duplicated1001.8508.0g8759.t1.1WD40 repeat-containing SMU1JBrowse
5187at6073Duplicated607.3386.0BRAKERHOCP00005005435.1lymphocyte expansion molecule-likeJBrowse
5187at6073Duplicated607.3386.0g11798.t1.1lymphocyte expansion molecule-likeJBrowse
5224at6073Fragmented431.9295.0BRAKERHOCP00005019492.1calcium-independent phospholipase A2-gamma-likeJBrowse
5397at6073Duplicated271.0129.0BRAKERHOCP00005011415.140S ribosomal protein S15aJBrowse
5397at6073Duplicated271.0129.0g15157.t1.140S ribosomal protein S15aJBrowse
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