BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9275at6073Complete755.0471.0pspe_0.1.m1.17968.m1peptidyl-prolyl cis-trans isomerase FKBP4-likeJBrowse
9281at6073Complete652.1485.0pspe_0.1.m1.63155.m1U3 small nucleolar RNA-associated protein 6JBrowse
9308at6073Complete1433.2681.0pspe_0.1.m1.27605.m1dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3BJBrowse
9329at6073Duplicated393.0268.0pspe_0.1.m1.48547.m1N-acetylglucosamine-1-phosphotransferase subunit gammaJBrowse
9329at6073Duplicated335.2226.0pspe_0.1.m1.64228.m1N-acetylglucosamine-1-phosphotransferase subunit gammaJBrowse
9376at6073Complete875.4445.0pspe_0.1.m1.16510.m1transcriptional regulator ERG-likeJBrowse
9394at6073Complete531.0271.0pspe_0.1.m1.51589.m1E3 ubiquitin-protein ligase CHIP-likeJBrowse
9452at6073Complete592.5312.0pspe_0.1.m1.63004.m1Cyclin-dependent kinase 6JBrowse
9467at6073Fragmented526.3339.0pspe_0.1.m1.34201.m1stabilizer of axonemal microtubules 1JBrowse
9477at6073Complete456.7288.0pspe_0.1.m1.28591.m1aristaless-related homeobox protein-likeJBrowse
9539at6073Complete375.4208.0pspe_0.1.m1.2234.m1copper homeostasis protein cutC homologJBrowse
9560at6073Complete267.1145.0pspe_0.1.m1.15225.m1protein cornichon homolog 4JBrowse
9593at6073Complete794.5364.0pspe_0.1.m1.2270.m1developmentally-regulated GTP-binding protein 2JBrowse
9621at6073Complete619.3311.0pspe_0.1.m1.31576.m1DNA-directed RNA polymerase III subunit RPC6-likeJBrowse
9633at6073Complete999.3710.0pspe_0.1.m1.10163.m1WD repeat-containing protein 75JBrowse
9703at6073Complete973.9552.0pspe_0.1.m1.37894.m1serine/threonine-protein kinase Nek11JBrowse
9733at6073Fragmented150.895.0pspe_0.1.m1.67881.m1cyclin-dependent kinase inhibitor 1-likeJBrowse
9775at6073Complete1102.8835.0pspe_0.1.m1.53754.m1MAP/microtubule affinity-regulating kinase 3-likeJBrowse
9777at6073Complete786.6400.0pspe_0.1.m1.32659.m1Protein farnesyltransferase subunit betaJBrowse
9835at6073Complete196.8139.0pspe_0.1.m1.28277.m1synaptonemal complex protein 2-likeJBrowse
Go to page: of 151 pages
TOP