BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76365at6073Fragmented454.4316.0ENSORFP00005044295.1palmitoleoyl-protein carboxylesterase notum1a-likeJBrowse
76374at6073Complete411.3268.0ENSORFP00005014368.1WW domain-binding protein 2JBrowse
76393at6073Complete507.9316.0ENSORFP00005032406.1testis-expressed protein 9JBrowse
76394at6073Complete360.9299.0ENSORFP00005038161.1pleckstrin homology domain-containing family A member 1-likeJBrowse
76398at6073Complete929.0684.0ENSORFP00005049123.1S1 RNA-binding domain-containing protein 1JBrowse
76410at6073Complete297.0177.0ENSORFP00005022643.1uncharacterized protein C5orf49-likeJBrowse
76411at6073Complete763.9555.0ENSORFP00005019960.1protein spire homolog 1JBrowse
76416at6073Complete566.9319.0ENSORFP00005001686.1UDP-N-acetylglucosamine transporterJBrowse
76430at6073Duplicated955.0691.0ENSORFP00005023925.1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76430at6073Duplicated852.6622.0ENSORFP00005023910.1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76430at6073Duplicated828.9613.0ENSORFP00005023896.1ubiquitin carboxyl-terminal hydrolase 19JBrowse
76433at6073Complete646.2434.0ENSORFP00005026087.1E3 ubiquitin-protein ligase MGRN1JBrowse
76438at6073Complete1756.21019.0ENSORFP00005016491.1Structural maintenance of chromosomes protein 6JBrowse
76442at6073Complete789.6477.0ENSORFP00005012792.1tetratricopeptide repeat protein 29-likeJBrowse
76456at6073Duplicated1136.7781.0ENSORFP00005005154.1twinkle protein, mitochondrial-likeJBrowse
76456at6073Duplicated1183.6779.0ENSORFP00005005140.1twinkle protein, mitochondrial-likeJBrowse
76460at6073Duplicated523.9389.0ENSORFP00005027409.1F-box/LRR-repeat protein 2-likeJBrowse
76460at6073Duplicated486.1389.0ENSORFP00005044134.1F-box/LRR-repeat protein 2-likeJBrowse
76460at6073Duplicated486.1389.0ENSORFP00005049899.1F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Complete825.7574.0ENSORFP00005037178.1short transient receptor potential channel 4-likeJBrowse
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