BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76516at6073Fragmented420.7337.0ENSORFP00005043616.1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete953.7622.0ENSORFP00005017587.1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Fragmented366.0261.0ENSORFP00005042064.1glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Fragmented1071.6102.0ENSORFP00005052742.1neurogenic locus notch homolog protein 1-likeJBrowse
76533at6073Complete460.8373.0ENSORFP00005037264.1Charged multivesicular body protein 7JBrowse
76536at6073Duplicated1167.2816.0ENSORFP00005033228.1transcription initiation factor TFIID subunit 4JBrowse
76536at6073Duplicated1151.5816.0ENSORFP00005033217.1transcription initiation factor TFIID subunit 4JBrowse
76543at6073Duplicated527.0331.0ENSORFP00005023016.1forkhead box protein N4-likeJBrowse
76543at6073Duplicated520.6331.0ENSORFP00005005926.1forkhead box protein N4-likeJBrowse
76543at6073Duplicated520.6331.0ENSORFP00005012142.1forkhead box protein N4-likeJBrowse
76543at6073Duplicated520.6331.0ENSORFP00005012149.1forkhead box protein N4-likeJBrowse
76543at6073Duplicated520.6331.0ENSORFP00005012180.1forkhead box protein N4-likeJBrowse
76545at6073Complete237.3137.0ENSORFP00005029168.1plasminogen receptor (KT)JBrowse
76547at6073Complete554.6400.0ENSORFP00005005971.1tubulin-specific chaperone E-likeJBrowse
76551at6073Duplicated476.9361.0ENSORFP00005030575.1N(6)-adenine-specific methyltransferase METTL4-likeJBrowse
76551at6073Duplicated446.6356.0ENSORFP00005030564.1N(6)-adenine-specific methyltransferase METTL4-likeJBrowse
76560at6073Duplicated497.5328.0ENSORFP00005024570.1methionyl-tRNA formyltransferase, mitochondrialJBrowse
76560at6073Duplicated458.5328.0ENSORFP00005024589.1methionyl-tRNA formyltransferase, mitochondrialJBrowse
76564at6073Complete281.6195.0ENSORFP00005014558.1Complement component 1 Q subcomponent-binding, mitochondrialJBrowse
76577at6073Duplicated250.9162.0ENSORFP00005049491.139S ribosomal protein L21, mitochondrial-likeJBrowse
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