BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76650at6073Duplicated661.2551.0ENSORFP00005040757.1biotin--protein ligaseJBrowse
76650at6073Duplicated678.1529.0ENSORFP00005040737.1biotin--protein ligaseJBrowse
76651at6073Complete694.3452.0ENSORFP00005019778.1la-related protein 6JBrowse
76659at6073Complete964.1646.0ENSORFP00005011486.1DNA mismatch repair Msh2-likeJBrowse
76665at6073Duplicated1041.1762.0ENSORFP00005015053.1coiled-coil and C2 domain-containing protein 1-likeJBrowse
76665at6073Duplicated1039.3747.0ENSORFP00005015048.1coiled-coil and C2 domain-containing protein 1-likeJBrowse
76690at6073Complete171.497.0ENSORFP00005032837.1protein boule-likeJBrowse
76693at6073Duplicated2524.01504.0ENSORFP00005027751.1voltage-dependent T-type calcium channel subunit alpha-1H-likeJBrowse
76693at6073Duplicated2525.01493.0ENSORFP00005027767.1voltage-dependent T-type calcium channel subunit alpha-1H-likeJBrowse
76693at6073Duplicated2408.81435.0ENSORFP00005027742.1voltage-dependent T-type calcium channel subunit alpha-1H-likeJBrowse
76694at6073Duplicated295.6224.0ENSORFP00005041249.1ankyrin repeat domain-containing 40JBrowse
76694at6073Duplicated293.6223.0ENSORFP00005032598.1ankyrin repeat domain-containing 40JBrowse
76696at6073Duplicated978.4647.0ENSORFP00005038684.1Glycosylphosphatidylinositol anchor attachment 1JBrowse
76696at6073Duplicated957.9647.0ENSORFP00005038678.1Glycosylphosphatidylinositol anchor attachment 1JBrowse
76696at6073Duplicated898.6647.0ENSORFP00005038668.1Glycosylphosphatidylinositol anchor attachment 1JBrowse
76701at6073Complete800.1573.0ENSORFP00005016459.1Calcium homeostasis endoplasmic reticulumJBrowse
76707at6073Duplicated462.7308.0ENSORFP00005001939.1coiled-coil domain-containing protein 149JBrowse
76707at6073Duplicated405.5283.0ENSORFP00005001922.1coiled-coil domain-containing protein 149JBrowse
76714at6073Duplicated838.9688.0ENSORFP00005014880.1LON peptidase N-terminal domain and RING finger 3JBrowse
76714at6073Duplicated826.0688.0ENSORFP00005014892.1LON peptidase N-terminal domain and RING finger 3JBrowse
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