BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75659at6073Duplicated651.7390.0XP_074631253.1RNA-binding protein Nova-1JBrowse
75659at6073Duplicated604.4349.0XP_074631254.1RNA-binding protein Nova-1JBrowse
75660at6073Complete642.6386.0XP_074610205.1importin subunit alpha-9-likeJBrowse
75664at6073Complete645.6398.0XP_074619184.1SynaptotagminJBrowse
75665at6073Duplicated345.5193.0XP_074635539.1transmembrane protein 17BJBrowse
75665at6073Duplicated341.7193.0XP_074635538.1transmembrane protein 17BJBrowse
75667at6073Duplicated992.6591.0XP_074612373.1Tyrosine-protein phosphatase non-receptor type 9JBrowse
75667at6073Duplicated911.4543.0XP_074612413.1Tyrosine-protein phosphatase non-receptor type 9JBrowse
75670at6073Complete999.1550.0XP_074619265.1cilia- and flagella-associated protein 157JBrowse
75671at6073Complete1629.4876.0XP_074629845.1ER degradation-enhancing alpha-mannosidase-like protein 3JBrowse
75678at6073Complete288.9187.0XP_074639787.1dynactin subunit 3JBrowse
75680at6073Complete758.2407.0XP_074626436.1serine/threonine-protein kinase 40JBrowse
75681at6073Duplicated1625.61014.0XP_074634837.1fibronectin type-III domain-containing 3A-likeJBrowse
75681at6073Duplicated1625.61014.0XP_074634838.1fibronectin type-III domain-containing 3A-likeJBrowse
75682at6073Complete425.5217.0XP_074633822.1spliceosome-associated CWC15 homologJBrowse
75701at6073Complete1634.7995.0XP_074619126.1Ankyrin repeat domain-containing protein 27JBrowse
75703at6073Duplicated2183.71458.0XP_074635932.1GATOR complex protein DEPDC5JBrowse
75703at6073Duplicated2181.41458.0XP_074635931.1GATOR complex protein DEPDC5JBrowse
75703at6073Duplicated2121.11458.0XP_074635933.1GATOR complex protein DEPDC5JBrowse
75710at6073Complete983.2616.0XP_074621897.1Mini-chromosome maintenance complex-bindingJBrowse
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