BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76836at6073Complete559.1624.0ENSORFP00005010604.1general transcription factor 3C polypeptide 4JBrowse
76840at6073Duplicated586.2433.0ENSORFP00005000620.1SHC-transforming protein 1JBrowse
76840at6073Duplicated607.2432.0ENSORFP00005000648.1SHC-transforming protein 1JBrowse
76843at6073Complete429.0275.0ENSORFP00005017302.1leucine-rich repeat-containing protein 59JBrowse
76846at6073Complete1918.51329.0ENSORFP00005028097.1gamma-tubulin complex component 6JBrowse
76853at6073Complete1599.21216.0ENSORFP00005016520.1RB1-inducible coiled-coil protein 1JBrowse
76855at6073Duplicated459.1312.0ENSORFP00005017924.1Protein kinase C and casein kinase substrate in neuronsJBrowse
76855at6073Duplicated449.6298.0ENSORFP00005017912.1Protein kinase C and casein kinase substrate in neuronsJBrowse
76861at6073Complete638.6416.0ENSORFP00005012143.1probable protein phosphatase 2C 21JBrowse
76864at6073Complete195.0191.0ENSORFP00005007100.1meiotic recombination protein REC114JBrowse
76873at6073Duplicated1834.01117.0ENSORFP00005001419.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1802.61075.0ENSORFP00005001431.1Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Duplicated620.0453.0ENSORFP00005039381.1ankyrin repeat and LEM domain-containing protein 1JBrowse
76877at6073Duplicated620.0451.0ENSORFP00005032002.1ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Complete666.5368.0ENSORFP00005027257.1signal peptide peptidase-like 3JBrowse
76879at6073Fragmented912.7668.0ENSORFP00005015791.1leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76889at6073Complete1259.11004.0ENSORFP00005028377.1testis-expressed protein 2JBrowse
76894at6073Complete815.4539.0ENSORFP00005029974.1serine/threonine-protein kinase unc-51JBrowse
76896at6073Fragmented405.7347.0ENSORFP00005010011.1protein tweety homolog 2-likeJBrowse
76901at6073Complete773.8564.0ENSORFP00005029594.1uncharacterized protein KIAA2013 homologJBrowse
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