BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76905at6073Duplicated440.4317.0ENSORFP00005027312.1zinc finger protein GLI2-likeJBrowse
76905at6073Duplicated440.3317.0ENSORFP00005027309.1zinc finger protein GLI2-likeJBrowse
76914at6073Complete428.3398.0ENSORFP00005033835.1E3 ubiquitin-protein ligase TRAIPJBrowse
76922at6073Duplicated538.7336.0ENSORFP00005016525.1UBX domain-containing protein 1JBrowse
76922at6073Duplicated471.7305.0ENSORFP00005016535.1UBX domain-containing protein 1JBrowse
76925at6073Complete2248.21494.0ENSORFP00005025939.1uncharacterized protein LOC116302959JBrowse
76930at6073Duplicated912.5721.0ENSORFP00005000370.1DNA replication factor Cdt1JBrowse
76930at6073Duplicated911.6720.0ENSORFP00005000355.1DNA replication factor Cdt1JBrowse
76938at6073Complete708.1453.0ENSORFP00005011930.1ELMO domain-containing protein 3JBrowse
76943at6073Complete274.8161.0ENSORFP00005000353.1Zinc finger MYND domain-containing protein 11JBrowse
76945at6073Duplicated372.0224.0ENSORFP00005019628.1Kv channel-interacting 1JBrowse
76945at6073Duplicated370.5212.0ENSORFP00005019621.1Kv channel-interacting 1JBrowse
76948at6073Complete510.2360.0ENSORFP00005012528.1coiled-coil domain-containing protein 92JBrowse
76990at6073Duplicated705.5511.0ENSORFP00005016614.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76990at6073Duplicated631.0494.0ENSORFP00005016629.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Complete641.7418.0ENSORFP00005010005.1glycerate kinase-likeJBrowse
76993at6073Complete653.8501.0ENSORFP00005019963.1afadin- and alpha-actinin-binding protein B-likeJBrowse
77002at6073Complete812.6523.0ENSORFP00005021625.1Deformed epidermal autoregulatory factor 1JBrowse
77005at6073Duplicated471.2313.0ENSORFP00005007120.1thioredoxin domain-containing protein 5JBrowse
77005at6073Duplicated453.3302.0ENSORFP00005007113.1thioredoxin domain-containing protein 5JBrowse
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