BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75765at6073Complete402.0258.0XP_074616150.1AnamorsinJBrowse
75777at6073Complete1183.2735.0XP_074614633.1TBC1 domain family member 12JBrowse
75783at6073Complete1933.71122.0XP_074620358.1Sister chromatid cohesion protein PDS5 AJBrowse
75790at6073Duplicated752.3433.0XP_074619933.1traB domain-containing proteinJBrowse
75790at6073Duplicated751.6429.0XP_074619932.1traB domain-containing proteinJBrowse
75793at6073Complete691.6408.0XP_074624838.1headcase proteinJBrowse
75797at6073Duplicated941.5525.0XP_074622260.1protein RFT1 homologJBrowse
75797at6073Duplicated831.5445.0XP_074622261.1protein RFT1 homologJBrowse
75798at6073Duplicated2054.71241.0XP_074634272.1pleckstrin homology-like domain family B member 1JBrowse
75798at6073Duplicated2054.71241.0XP_074634273.1pleckstrin homology-like domain family B member 1JBrowse
75801at6073Duplicated887.1464.0XP_074638949.1rho GTPase-activating protein 44JBrowse
75801at6073Duplicated861.4464.0XP_074638947.1rho GTPase-activating protein 44JBrowse
75801at6073Duplicated815.2446.0XP_074638948.1rho GTPase-activating protein 44JBrowse
75806at6073Duplicated395.7209.0XP_074617454.1dnaJ homolog subfamily C member 5-likeJBrowse
75806at6073Duplicated384.6196.0XP_074617455.1dnaJ homolog subfamily C member 5-likeJBrowse
75814at6073Complete648.6322.0XP_074629887.1transcriptional repressor protein YY1-likeJBrowse
75815at6073Complete347.4200.0XP_074632622.126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Duplicated563.2338.0XP_074618921.1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75820at6073Duplicated563.1338.0XP_074618920.1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75826at6073Complete542.0315.0XP_074617698.1inactive hydroxysteroid dehydrogenase-like protein 1JBrowse
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