BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77006at6073Complete502.3296.0ENSORFP00005006238.1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Complete415.9279.0ENSORFP00005019908.1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Complete1232.7806.0ENSORFP00005003767.1radial spoke head 10 homolog B-likeJBrowse
77034at6073Fragmented1292.71253.0ENSORFP00005033522.1putative leucine-rich repeat-containing protein DDB_G0290503JBrowse
77038at6073Complete1865.81299.0ENSORFP00005016434.1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Complete362.7252.0ENSORFP00005028270.1E3 ubiquitin-protein ligase rnf146JBrowse
77049at6073Duplicated734.7500.0ENSORFP00005028632.1stromal interaction molecule 1-likeJBrowse
77049at6073Duplicated734.6500.0ENSORFP00005028639.1stromal interaction molecule 1-likeJBrowse
77067at6073Complete618.3454.0ENSORFP00005053660.1protein Spindly-likeJBrowse
77068at6073Complete1915.91217.0ENSORFP00005015543.1kinesin-like protein 1 isoform X1JBrowse
77078at6073Fragmented578.3285.0ENSORFP00005033001.1coiled-coil domain-containing protein 96JBrowse
77082at6073Complete414.5275.0ENSORFP00005005456.1uncharacterized protein LOC116292340JBrowse
77087at6073Duplicated521.4394.0ENSORFP00005040096.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77087at6073Duplicated521.4394.0ENSORFP00005051726.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77087at6073Duplicated468.8362.0ENSORFP00005040088.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77087at6073Duplicated467.5360.0ENSORFP00005051717.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77089at6073Complete980.8868.0ENSORFP00005016986.1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Duplicated602.0423.0ENSORFP00005041765.1nucleotide exchange factor SIL1JBrowse
77092at6073Duplicated513.0354.0ENSORFP00005048717.1nucleotide exchange factor SIL1JBrowse
77093at6073Duplicated281.4179.0ENSORFP00005011590.1tetratricopeptide repeat protein 33JBrowse
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