BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77093at6073Duplicated280.2179.0ENSORFP00005011593.1tetratricopeptide repeat protein 33JBrowse
77095at6073Complete666.2428.0ENSORFP00005007181.1DNA cross-link repair 1AJBrowse
77101at6073Fragmented276.9443.0ENSORFP00005028439.1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Duplicated906.2707.0ENSORFP00005032855.1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77103at6073Duplicated830.2685.0ENSORFP00005032864.1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77103at6073Duplicated846.6676.0ENSORFP00005032844.1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77114at6073Complete1199.1970.0ENSORFP00005001153.1folliculin-interacting protein 1JBrowse
77115at6073Complete692.9469.0ENSORFP00005006713.1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Complete157.4114.0ENSORFP00005002105.1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete592.0410.0ENSORFP00005011014.1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Fragmented329.6331.0ENSORFP00005022988.1kinetochore protein NDC80 homologJBrowse
77163at6073Fragmented457.1349.0ENSORFP00005034925.1coiled-coil domain-containing protein 138JBrowse
77166at6073Complete584.2410.0ENSORFP00005002426.1forkhead box protein J3-likeJBrowse
77171at6073Duplicated395.8287.0ENSORFP00005037442.1transcriptional regulator Myc-1-likeJBrowse
77171at6073Duplicated395.8287.0ENSORFP00005037448.1transcriptional regulator Myc-1-likeJBrowse
77171at6073Duplicated395.8287.0ENSORFP00005049172.1transcriptional regulator Myc-1-likeJBrowse
77171at6073Duplicated353.8279.0ENSORFP00005049182.1transcriptional regulator Myc-1-likeJBrowse
77172at6073Complete393.0288.0ENSORFP00005042914.1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77182at6073Complete343.6267.0ENSORFP00005012971.1transcription initiation factor IIA subunit 1JBrowse
77184at6073Complete858.1549.0ENSORFP00005026022.1transcriptional protein SWT1-likeJBrowse
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