BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6261at6073Duplicated679.3384.0XP_074629246.1SEC14 cytosolic factor-likeJBrowse
6261at6073Duplicated673.0363.0XP_074629250.1SEC14 cytosolic factor-likeJBrowse
6261at6073Duplicated663.3357.0XP_074629248.1SEC14 cytosolic factor-likeJBrowse
6261at6073Duplicated622.2336.0XP_074629251.1SEC14 cytosolic factor-likeJBrowse
6261at6073Duplicated622.2336.0XP_074629252.1SEC14 cytosolic factor-likeJBrowse
6314at6073Duplicated897.8591.0XP_074635547.1SET and MYND domain-containing protein 4JBrowse
6314at6073Duplicated897.8591.0XP_074635548.1SET and MYND domain-containing protein 4JBrowse
6314at6073Duplicated897.8591.0XP_074635549.1SET and MYND domain-containing protein 4JBrowse
6330at6073Duplicated971.6472.0XP_074617787.1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6330at6073Duplicated967.8468.0XP_074617788.1ER degradation-enhancing alpha-mannosidase-like protein 2JBrowse
6358at6073Complete713.7358.0XP_074638549.1dual specificity mitogen-activated protein kinase kinase 1JBrowse
6371at6073Complete431.9200.0XP_074635537.1NADH-ubiquinone oxidoreductase subunit 8JBrowse
6375at6073Duplicated752.7414.0XP_074615070.1putative cytochrome P450 120JBrowse
6375at6073Duplicated752.7414.0XP_074615071.1putative cytochrome P450 120JBrowse
6375at6073Duplicated752.7414.0XP_074615072.1putative cytochrome P450 120JBrowse
6375at6073Duplicated752.7414.0XP_074615073.1putative cytochrome P450 120JBrowse
6403at6073Complete277.8151.0XP_074637275.1bis(5'-adenosyl)-triphosphataseJBrowse
6410at6073Duplicated1375.0741.0XP_074619948.1ubiquitin-protein ligase E3AJBrowse
6410at6073Duplicated1374.4741.0XP_074619949.1ubiquitin-protein ligase E3AJBrowse
6431at6073Complete445.0268.0XP_074622916.1probable transcriptional regulatory protein Kole_1935JBrowse
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