BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5460at6073Duplicated349.5214.0BRAKERHOCP00005017401.1glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5460at6073Duplicated349.5214.0g1004.t1.1glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5475at6073Duplicated216.9184.0BRAKERHOCP00005017302.1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5475at6073Duplicated216.9184.0g1601.t1.1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5506at6073Fragmented153.1117.0BRAKERHOCP00005009726.128S ribosomal protein S24, mitochondrialJBrowse
5527at6073Duplicated213.5151.0BRAKERHOCP00005014238.1protein SYS1 homologJBrowse
5527at6073Duplicated213.5151.0g17687.t1.1protein SYS1 homologJBrowse
5616at6073Duplicated315.6181.0BRAKERHOCP00005005085.1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5616at6073Duplicated315.6181.0g12526.t1.1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5670at6073Duplicated286.1226.0BRAKERHOCP00005002753.1MIT domain-containing protein 1JBrowse
5670at6073Duplicated286.1226.0g7628.t1.1MIT domain-containing protein 1JBrowse
5708at6073Duplicated492.0332.0BRAKERHOCP00005002342.1ATPase family AAA domain-containing 1JBrowse
5708at6073Duplicated492.0332.0g7660.t1.1ATPase family AAA domain-containing 1JBrowse
5718at6073Duplicated1779.8964.0BRAKERHOCP00005013472.1Valine--tRNA ligaseJBrowse
5718at6073Duplicated1779.8964.0g20174.t1.1Valine--tRNA ligaseJBrowse
5762at6073Duplicated455.9286.0BRAKERHOCP00005009497.1ribonuclease H2 subunit AJBrowse
5762at6073Duplicated455.9286.0g15327.t1.1ribonuclease H2 subunit AJBrowse
5972at6073Fragmented113.1184.0BRAKERHOCP00005008039.1GRB2-associated-binding protein 1-likeJBrowse
6014at6073Duplicated495.8366.0BRAKERHOCP00005010930.1uncharacterized protein LOC116304099JBrowse
6014at6073Duplicated495.8366.0g14838.t1.1uncharacterized protein LOC116304099JBrowse
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