BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9852at6073Complete610.6333.0pspe_0.1.m1.49351.m1solute carrier family 35 member E2A-likeJBrowse
9931at6073Complete500.2366.0pspe_0.1.m1.24144.m1nuclear-interacting partner of ALKJBrowse
9934at6073Duplicated813.1462.0pspe_0.1.m1.26726.m1Alpha-(1,3)-fucosyltransferase 10JBrowse
9934at6073Duplicated813.1462.0pspe_0.1.m1.30657.m1Alpha-(1,3)-fucosyltransferase 10JBrowse
9941at6073Complete279.3173.0pspe_0.1.m1.57891.m1uncharacterized protein LOC130613352 isoform X1JBrowse
9964at6073Complete2443.61582.0pspe_0.1.m1.37495.m1GREB1-like proteinJBrowse
10077at6073Complete713.7403.0pspe_0.1.m1.42160.m1serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit BJBrowse
10181at6073Complete301.0235.0pspe_0.1.m1.54515.m1uncharacterized protein LOC116286471JBrowse
10192at6073Complete819.2441.0pspe_0.1.m1.60757.m1V-type proton ATPase subunit HJBrowse
10196at6073Complete420.7262.0pspe_0.1.m1.29976.m1trimeric intracellular cation channel typeJBrowse
10213at6073Complete270.2160.0pspe_0.1.m1.50432.m1CB1 cannabinoid receptor-interacting protein 1JBrowse
10225at6073Complete290.4199.0pspe_0.1.m1.52898.m1nucleoside diphosphate-linked moiety X motif 8-likeJBrowse
10231at6073Complete1000.1623.0pspe_0.1.m1.46987.m1alkylated DNA repair protein alkB homolog 8-likeJBrowse
10260at6073Complete848.9467.0pspe_0.1.m1.33252.m1probable aminopeptidase NPEPL1JBrowse
10283at6073Complete734.6621.0pspe_0.1.m1.15487.m1solute carrier organic anion transporter family member 4A1-likeJBrowse
10348at6073Complete322.3178.0pspe_0.1.m1.7887.m1Pancreas transcription factor 1 subunit alphaJBrowse
10369at6073Complete448.4218.0pspe_0.1.m1.26552.m1nucleoside diphosphate kinase homolog 5JBrowse
10403at6073Duplicated1209.1697.0pspe_0.1.m1.20073.m1Serine/threonine-protein kinase sik2JBrowse
10403at6073Duplicated1209.1697.0pspe_0.1.m1.63554.m1Serine/threonine-protein kinase sik2JBrowse
10404at6073Complete4311.02227.0pspe_0.1.m1.32607.m1CCR4-NOT transcription complex subunit 1JBrowse
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