BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8715at6073Complete239.3140.0CAB3983056.1AP-4 complex subunit sigma-1JBrowse
8718at6073Duplicated1608.1975.0CAB4010169.1Ubiquitin conjugation factor E4 BJBrowse
8718at6073Duplicated1596.1975.0CAB4010168.1Ubiquitin conjugation factor E4 BJBrowse
8718at6073Duplicated1376.8850.0CAB4010170.1Ubiquitin conjugation factor E4 BJBrowse
8721at6073Complete858.6462.0CAB3988740.1N-acetylgalactosamine kinaseJBrowse
8749at6073Complete827.8620.0CAB4020127.1epithelial discoidin domain-containing receptor 1JBrowse
8765at6073Complete631.8318.0CAB4015512.1transaldolaseJBrowse
8767at6073Fragmented678.5333.0CAB3990566.1importin-5JBrowse
8805at6073Complete589.3399.0CAB3996947.1potassium voltage-gated channel Shal-likeJBrowse
8845at6073Complete559.4431.0CAB3999962.1early growth response protein 1JBrowse
8864at6073Complete371.8261.0CAB4010376.1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Duplicated449.8254.0CAB3982818.1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8869at6073Duplicated449.5254.0CAB3982817.1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8874at6073Complete518.8303.0CAB4025171.1regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Complete738.7398.0CAB3997428.1transcriptional enhancer factor TEF-1-likeJBrowse
8905at6073Complete413.5403.0CAB3990078.1protein naked cuticle homolog 2-likeJBrowse
8946at6073Complete226.0120.0CAB3998656.1NADH dehydrogenase JBrowse
8984at6073Complete831.6431.0CAB3996683.16-phosphofructo-2-kinase/fructose-2, 6-bisphosphataseJBrowse
9011at6073Fragmented337.1204.0CAB4032798.1Coronin-7JBrowse
9020at6073Complete977.1547.0CAB4011809.1tRNA (guanine(26)-N(2))-dimethyltransferase-likeJBrowse
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