BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6431at6073Duplicated368.5242.0ENSORFP00005014461.1probable transcriptional regulatory protein Kole_1935JBrowse
6483at6073Complete2087.5963.0ENSORFP00005015403.1UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6500at6073Duplicated672.1426.0ENSORFP00005030258.1uncharacterized protein LOC110045530 isoform X1JBrowse
6500at6073Duplicated650.0419.0ENSORFP00005048633.1uncharacterized protein LOC110045530 isoform X1JBrowse
6500at6073Duplicated636.2402.0ENSORFP00005030266.1uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Duplicated1308.2788.0ENSORFP00005049134.1anion exchange protein 2-likeJBrowse
6511at6073Duplicated1300.3788.0ENSORFP00005049126.1anion exchange protein 2-likeJBrowse
6511at6073Duplicated1271.0781.0ENSORFP00005049141.1anion exchange protein 2-likeJBrowse
6528at6073Duplicated453.0236.0ENSORFP00005016964.1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6528at6073Duplicated453.0236.0ENSORFP00005020710.1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6528at6073Duplicated453.0236.0ENSORFP00005049725.1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6530at6073Complete346.5232.0ENSORFP00005026936.1sex-determining region Y proteinJBrowse
6591at6073Complete551.1308.0ENSORFP00005033780.1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Complete1171.0783.0ENSORFP00005008877.1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Complete502.3256.0ENSORFP00005018002.1probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Complete1652.6774.0ENSORFP00005024660.1AconitaseJBrowse
6686at6073Complete275.6252.0ENSORFP00005045041.1transmembrane protein 248JBrowse
6716at6073Complete164.8100.0ENSORFP00005039550.1Small integral membrane protein 14JBrowse
6727at6073Complete406.6220.0ENSORFP00005025776.1Radial spoke head 1JBrowse
6767at6073Duplicated181.699.0ENSORFP00005052612.110 kda heat shock proteinJBrowse
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