BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
10822at6073Complete156.3176BRAKERIOWP00000013208.1hematopoietically-expressed homeobox protein hhexJBrowse
10935at6073Complete160.4230BRAKERIOWP00000004679.1uncharacterized protein LOC114960186JBrowse
10942at6073Complete260.2275BRAKERIOWP00000013023.1hsp70-binding protein 1JBrowse
10960at6073Complete950.0609BRAKERIOWP00000003897.1collagen type IV alpha-3-binding proteinJBrowse
10961at6073Complete788.4507BRAKERIOWP00000002946.1amidophosphoribosyltransferaseJBrowse
10963at6073Duplicated338.6327BRAKERIOWP00000012273.1archaemetzincin-2JBrowse
10963at6073Duplicated330.4298BRAKERIOWP00000012268.1archaemetzincin-2JBrowse
10990at6073Complete611.3448BRAKERIOWP00000003523.1stabilizer of axonemal microtubules 2JBrowse
11001at6073Complete202.6173BRAKERIOWP00000010424.1uncharacterized protein LOC114521710JBrowse
11023at6073Complete368.9211BRAKERIOWP00000001060.1trafficking protein particle complex subunit 4JBrowse
11074at6073Complete534.3304BRAKERIOWP00000001381.1inositol phosphorylceramide synthase catalytic subunit aur1JBrowse
11090at6073Complete928.0474BRAKERIOWP00000003336.1serine/threonine-protein phosphatase 5JBrowse
11147at6073Complete224.1199BRAKERIOWP00000001384.1ADP-ribosylation factor-like protein 15JBrowse
11149at6073Complete224.3144BRAKERIOWP00000003379.1Ubiquitin-conjugating enzyme E2 CJBrowse
11194at6073Complete298.8265BRAKERIOWP00000017454.1THUMP domain-containing protein 1JBrowse
11215at6073Complete1286.9728BRAKERIOWP00000001216.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11255at6073Complete274.5243BRAKERIOWP00000000244.1histone-lysine N-methyltransferase SETMARJBrowse
11491at6073Complete168.5118BRAKERIOWP00000014697.1microtubule-associated proteins 1A/1B light chain 3A-likeJBrowse
11560at6073Complete1076.2753BRAKERIOWP00000002212.1serine/threonine-protein phosphatase 4 regulatory subunit 1JBrowse
11581at6073Complete172.3140BRAKERIOWP00000009678.1ribonuclease P/MRP protein subunit POP5JBrowse
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