BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75916at6073Duplicated915.3584.0XP_074612899.1protein SERAC1-likeJBrowse
75916at6073Duplicated878.3563.0XP_074612900.1protein SERAC1-likeJBrowse
75916at6073Duplicated892.8532.0XP_074612901.1protein SERAC1-likeJBrowse
75918at6073Complete875.0553.0XP_074634130.1cell division cycle 7-related protein kinaseJBrowse
75937at6073Complete920.7564.0XP_074616324.1serine/threonine-protein kinase greatwall-likeJBrowse
75940at6073Duplicated1364.8838.0XP_074608427.1exostosin-like 3JBrowse
75940at6073Duplicated1364.8838.0XP_074608428.1exostosin-like 3JBrowse
75940at6073Duplicated1364.8838.0XP_074608429.1exostosin-like 3JBrowse
75946at6073Complete579.5316.0XP_074612169.1JmjC domain-containing protein 7JBrowse
75949at6073Complete414.0252.0XP_074635257.1syntaxin-7-likeJBrowse
75956at6073Complete561.2355.0XP_074629416.1Protein Wnt-6JBrowse
75959at6073Duplicated629.9376.0XP_074627453.1Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated623.3376.0XP_074627454.1Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated596.6376.0XP_074627456.1Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated596.0376.0XP_074627457.1Arginyl-tRNA--protein transferase 1JBrowse
75959at6073Duplicated563.8325.0XP_074627455.1Arginyl-tRNA--protein transferase 1JBrowse
75962at6073Complete243.8166.0XP_074637619.1mediator of RNA polymerase II transcription subunit 19JBrowse
75968at6073Complete1442.5802.0XP_074622293.1helicase POLQ-likeJBrowse
75973at6073Duplicated766.7425.0XP_074616381.1tRNA-dihydrouridine(20) synthase JBrowse
75973at6073Duplicated724.1425.0XP_074616382.1tRNA-dihydrouridine(20) synthase JBrowse
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