BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77192at6073Duplicated398.6268.0ENSORFP00005016432.1HAUS augmin-like complex subunit 1JBrowse
77192at6073Duplicated376.1253.0ENSORFP00005016428.1HAUS augmin-like complex subunit 1JBrowse
77195at6073Duplicated310.1317.0ENSORFP00005016455.1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77195at6073Duplicated307.8314.0ENSORFP00005016460.1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Fragmented340.9190.0ENSORFP00005024253.1reticulon-1-AJBrowse
77208at6073Complete612.3445.0ENSORFP00005045345.1ribonuclease IIIJBrowse
77217at6073Complete404.0253.0ENSORFP00005007499.1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Complete402.8258.0ENSORFP00005007614.1uncharacterized protein LOC114517244JBrowse
77225at6073Complete2695.01965.0ENSORFP00005005250.1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Complete727.8443.0ENSORFP00005035282.1ETS translocation variant 1JBrowse
77228at6073Complete391.9303.0ENSORFP00005013338.1transcription factor AP-1-likeJBrowse
77240at6073Fragmented638.2555.0ENSORFP00005033968.1protein PAT1 homolog 1JBrowse
77246at6073Duplicated445.2361.0ENSORFP00005004071.1Stromal membrane-associated protein 1JBrowse
77246at6073Duplicated445.2361.0ENSORFP00005033460.1Stromal membrane-associated protein 1JBrowse
77250at6073Duplicated1218.4889.0ENSORFP00005019594.1rab GTPase-binding effector protein 1JBrowse
77250at6073Duplicated1150.7889.0ENSORFP00005019603.1rab GTPase-binding effector protein 1JBrowse
77273at6073Complete1964.01261.0ENSORFP00005031355.1androglobin-likeJBrowse
77285at6073Duplicated139.499.0ENSORFP00005026547.139S ribosomal protein L52, mitochondrial-likeJBrowse
77285at6073Duplicated139.499.0ENSORFP00005034643.139S ribosomal protein L52, mitochondrial-likeJBrowse
77287at6073Duplicated194.4149.0ENSORFP00005004142.1uncharacterized protein LOC110238137JBrowse
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