BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75973at6073Duplicated652.2351.0XP_074616383.1tRNA-dihydrouridine(20) synthase JBrowse
75974at6073Duplicated1189.5671.0XP_074607651.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75974at6073Duplicated1189.5671.0XP_074607652.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75974at6073Duplicated1189.5671.0XP_074607654.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75974at6073Duplicated1189.5671.0XP_074607655.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75975at6073Complete797.2459.0XP_074617452.1transmembrane protein 161B-likeJBrowse
75977at6073Duplicated656.9428.0XP_074638104.1Epsin-2JBrowse
75977at6073Duplicated656.9428.0XP_074638105.1Epsin-2JBrowse
75977at6073Duplicated656.9428.0XP_074638106.1Epsin-2JBrowse
75977at6073Duplicated656.9428.0XP_074638107.1Epsin-2JBrowse
75985at6073Duplicated269.8171.0XP_074610234.1EKC/KEOPS complex subunit Tprkb-likeJBrowse
75985at6073Duplicated269.8171.0XP_074610235.1EKC/KEOPS complex subunit Tprkb-likeJBrowse
75987at6073Complete767.4475.0XP_074622444.1spartin-likeJBrowse
76002at6073Duplicated1119.9705.0XP_074639609.1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76002at6073Duplicated1119.2705.0XP_074639610.1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete1353.4909.0XP_074635399.1Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76009at6073Complete1121.6699.0XP_074606468.1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Complete1026.6631.0XP_074630987.1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Complete1274.3781.0XP_074621025.1Progesterone-induced-blocking factor 1JBrowse
76027at6073Complete409.6243.0XP_074625600.1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
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