BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76028at6073Complete365.6220.0XP_074615726.1bcl-2 homologous antagonist killerJBrowse
76032at6073Complete366.1251.0XP_074616152.1AN1-type zinc finger protein 1JBrowse
76033at6073Complete1022.8644.0XP_074638248.1CyclinJBrowse
76034at6073Complete238.0164.0XP_074624567.1protein LSM12 homologJBrowse
76036at6073Complete723.4428.0XP_074623046.1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete371.7216.0XP_074631662.1SNAREJBrowse
76040at6073Complete1629.3929.0XP_074613553.1GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Complete621.3356.0XP_074615603.1protein O-mannose kinase-likeJBrowse
76042at6073Complete863.3497.0XP_074611896.1potassium voltage-gated channel Shaw-likeJBrowse
76047at6073Complete888.8531.0XP_074626337.1frizzled-4JBrowse
76049at6073Duplicated597.0375.0XP_074631967.1integral membrane protein GPR137B-likeJBrowse
76049at6073Duplicated537.7375.0XP_074631968.1integral membrane protein GPR137B-likeJBrowse
76056at6073Complete316.2233.0XP_074621019.1high mobility group protein B3-likeJBrowse
76060at6073Complete316.3179.0XP_074623564.1acyl-CoA-binding domain-containing protein 2JBrowse
76070at6073Duplicated627.7392.0XP_074635830.1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76070at6073Duplicated583.5392.0XP_074635831.1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Duplicated280.3191.0XP_074617847.1transmembrane protein 199JBrowse
76078at6073Duplicated279.3191.0XP_074617846.1transmembrane protein 199JBrowse
76083at6073Complete446.0251.0XP_074638184.1endonuclease V-likeJBrowse
76085at6073Duplicated373.4272.0XP_074630072.1SynaptotagminJBrowse
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