BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77381at6073Duplicated978.0759.0ENSORFP00005054216.1coiled-coil domain-containing protein 186JBrowse
77381at6073Duplicated951.4759.0ENSORFP00005054213.1coiled-coil domain-containing protein 186JBrowse
77382at6073Duplicated287.8230.0ENSORFP00005027055.1eukaryotic translation initiation factor 3 subunit JJBrowse
77382at6073Duplicated257.8187.0ENSORFP00005009283.1eukaryotic translation initiation factor 3 subunit JJBrowse
77383at6073Complete445.2301.0ENSORFP00005040414.1probable rRNA-processing protein EBP2JBrowse
77385at6073Duplicated692.4416.0ENSORFP00005006500.1TBC1 domain family member 15JBrowse
77385at6073Duplicated699.7415.0ENSORFP00005023469.1TBC1 domain family member 15JBrowse
77386at6073Complete266.5283.0ENSORFP00005025046.1G kinase-anchoring protein 1JBrowse
77391at6073Complete792.6532.0ENSORFP00005017426.1Cleavage stimulation factor subunit 2JBrowse
77400at6073Fragmented413.7290.0ENSORFP00005044591.1forkhead box protein P1-likeJBrowse
77410at6073Complete1097.3942.0ENSORFP00005025877.1nuclear exosome regulator NRDE2JBrowse
77414at6073Duplicated470.5397.0ENSORFP00005029325.1Myelin expression factor 2JBrowse
77414at6073Duplicated469.9396.0ENSORFP00005029307.1Myelin expression factor 2JBrowse
77415at6073Complete335.1252.0ENSORFP00005026852.1ELL-associated factor 1JBrowse
77417at6073Complete503.2446.0ENSORFP00005024851.1BICD family-like cargo adapter 1JBrowse
77426at6073Complete1132.4683.0ENSORFP00005008109.1enhancer of polycomb homolog 1JBrowse
77435at6073Duplicated437.9333.0ENSORFP00005024965.1nuclear cap-binding protein subunit 3JBrowse
77435at6073Duplicated381.8321.0ENSORFP00005024947.1nuclear cap-binding protein subunit 3JBrowse
77439at6073Complete1125.9776.0ENSORFP00005012395.1coiled-coil domain-containing protein 178JBrowse
77456at6073Complete1338.3823.0ENSORFP00005024365.1MYCBP-associated proteinJBrowse
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