BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77470at6073Complete583.7398.0ENSORFP00005015745.1cyclic AMP-dependent transcription factor ATF-2JBrowse
77476at6073Fragmented346.8433.0ENSORFP00005016878.1uncharacterized protein LOC116293469JBrowse
77495at6073Complete835.4509.0ENSORFP00005017333.1cilia- and flagella-associated protein 53JBrowse
77496at6073Fragmented625.3340.0ENSORFP00005018475.1caskin-2JBrowse
77499at6073Complete795.9486.0ENSORFP00005015254.1AN1-type zinc finger protein 4JBrowse
77502at6073Duplicated522.6325.0ENSORFP00005011732.1Peptidyl-prolyl cis-trans isomeraseJBrowse
77502at6073Duplicated521.3325.0ENSORFP00005042998.1Peptidyl-prolyl cis-trans isomeraseJBrowse
77505at6073Complete899.0578.0ENSORFP00005022238.1HAUS augmin-like complex subunit 5JBrowse
77509at6073Fragmented1010.1785.0ENSORFP00005035297.1uncharacterized protein KIAA0825-likeJBrowse
77510at6073Complete1049.8682.0ENSORFP00005013689.1trichohyalinJBrowse
77513at6073Duplicated409.0322.0ENSORFP00005033944.1replication stress response regulator SDE2JBrowse
77513at6073Duplicated393.4291.0ENSORFP00005033949.1replication stress response regulator SDE2JBrowse
77521at6073Complete508.3412.0ENSORFP00005019558.1uncharacterized protein LOC114524962JBrowse
77523at6073Complete413.0312.0ENSORFP00005027330.1RILP-like protein 1JBrowse
77525at6073Complete709.8505.0ENSORFP00005024008.1nucleoporin NDC1-likeJBrowse
77528at6073Duplicated614.0465.0ENSORFP00005005407.1Leucine-rich repeat-containing protein 56JBrowse
77528at6073Duplicated605.7465.0ENSORFP00005005395.1Leucine-rich repeat-containing protein 56JBrowse
77540at6073Duplicated760.8473.0ENSORFP00005001208.1rhotekin-2-likeJBrowse
77540at6073Duplicated727.7422.0ENSORFP00005001215.1rhotekin-2-likeJBrowse
77545at6073Complete577.3438.0ENSORFP00005009325.1alpha-tubulin N-acetyltransferaseJBrowse
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