BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76185at6073Complete1564.5958.0XP_074635908.1Centrosomal of 120 kDaJBrowse
76188at6073Duplicated354.9186.0XP_074605933.1Golgi apparatus membrane protein TVP23 homolog B-likeJBrowse
76188at6073Duplicated355.7185.0XP_074605934.1Golgi apparatus membrane protein TVP23 homolog B-likeJBrowse
76194at6073Complete559.6367.0XP_074610406.1E3 ubiquitin-protein ligase HakaiJBrowse
76199at6073Complete840.0459.0XP_074634924.1thiamine transporter 1JBrowse
76203at6073Complete1237.7693.0XP_074626299.1MacoilinJBrowse
76204at6073Complete1974.81230.0XP_074617712.1serine/threonine-protein kinase ULK4 isoform X1JBrowse
76216at6073Complete365.3243.0XP_074634953.1Box C/D snoRNA protein 1JBrowse
76222at6073Complete296.1163.0XP_074613667.1transmembrane protein 128JBrowse
76225at6073Duplicated569.9366.0XP_074614164.1putative neutral sphingomyelinaseJBrowse
76225at6073Duplicated540.9355.0XP_074614165.1putative neutral sphingomyelinaseJBrowse
76228at6073Duplicated947.9607.0XP_074620152.1F-BAR and double SH3 domains protein 2JBrowse
76228at6073Duplicated814.4528.0XP_074620153.1F-BAR and double SH3 domains protein 2JBrowse
76229at6073Complete336.1195.0XP_074629782.1pyroglutamyl-peptidase 1JBrowse
76233at6073Complete666.5434.0XP_074622902.1protein odr-4 homologJBrowse
76237at6073Duplicated569.9383.0XP_074623886.1stAR-related lipid transfer protein 3-likeJBrowse
76237at6073Duplicated569.2383.0XP_074623887.1stAR-related lipid transfer protein 3-likeJBrowse
76239at6073Complete369.0214.0XP_074638159.1UPF0193 protein EVG1JBrowse
76243at6073Duplicated635.5416.0XP_074624936.1AT-rich interactive domain-containing protein 3C-likeJBrowse
76243at6073Duplicated635.3415.0XP_074624925.1AT-rich interactive domain-containing protein 3C-likeJBrowse
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