BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76243at6073Duplicated635.3415.0XP_074624931.1AT-rich interactive domain-containing protein 3C-likeJBrowse
76243at6073Duplicated635.2415.0XP_074624917.1AT-rich interactive domain-containing protein 3C-likeJBrowse
76246at6073Complete561.1314.0XP_074617278.1zinc transporter Slc39a7-likeJBrowse
76254at6073Complete973.2518.0XP_074610624.1cilia- and flagella-associated protein 100JBrowse
76256at6073Complete530.1326.0XP_074613674.1zinc transporter ZIP13JBrowse
76258at6073Duplicated2018.01131.0XP_074617824.1Synaptojanin-1JBrowse
76258at6073Duplicated2021.61115.0XP_074617825.1Synaptojanin-1JBrowse
76265at6073Complete620.9386.0XP_074628124.1zinc finger CCCH domain-containing protein 15JBrowse
76271at6073Complete898.9558.0XP_074627588.1DNA polymerase etaJBrowse
76277at6073Complete604.2400.0XP_074631252.1leucine-rich repeat protein 1JBrowse
76286at6073Complete755.2478.0XP_074630109.1AP-5 complex subunit mu-1JBrowse
76291at6073Duplicated1116.1614.0XP_074625132.1peroxisomal targeting signal 1 receptor-likeJBrowse
76291at6073Duplicated1116.1614.0XP_074625133.1peroxisomal targeting signal 1 receptor-likeJBrowse
76291at6073Duplicated1053.5614.0XP_074625134.1peroxisomal targeting signal 1 receptor-likeJBrowse
76298at6073Complete1131.2758.0XP_074633477.1zinc finger and BTB domain-containing protein 24-likeJBrowse
76299at6073Complete1791.31270.0XP_074614492.1DNA topoisomerase 2-binding protein 1JBrowse
76306at6073Complete957.9710.0XP_074619042.1terminal nucleotidyltransferase 4B-likeJBrowse
76315at6073Duplicated990.6712.0XP_074636317.1transmembrane protein 214-AJBrowse
76315at6073Duplicated981.2712.0XP_074636318.1transmembrane protein 214-AJBrowse
76320at6073Duplicated927.9660.0XP_074614754.1centrosomal protein of 83 kDa-likeJBrowse
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