BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76456at6073Duplicated1249.9782.0XP_074638651.1twinkle protein, mitochondrial-likeJBrowse
76456at6073Duplicated1249.9782.0XP_074638652.1twinkle protein, mitochondrial-likeJBrowse
76457at6073Duplicated1564.8914.0XP_074613609.1protein CIP2A homologJBrowse
76457at6073Duplicated1408.1832.0XP_074613610.1protein CIP2A homologJBrowse
76460at6073Complete565.0395.0XP_074620837.1F-box/LRR-repeat protein 2-likeJBrowse
76463at6073Complete1065.6640.0XP_074609840.1short transient receptor potential channel 4-likeJBrowse
76464at6073Complete553.4311.0XP_074614527.1syntaxin-18JBrowse
76465at6073Duplicated931.7603.0XP_074611528.1Cysteine-rich protein 2-binding proteinJBrowse
76465at6073Duplicated913.2590.0XP_074611529.1Cysteine-rich protein 2-binding proteinJBrowse
76465at6073Duplicated913.2590.0XP_074611531.1Cysteine-rich protein 2-binding proteinJBrowse
76465at6073Duplicated913.2590.0XP_074611532.1Cysteine-rich protein 2-binding proteinJBrowse
76471at6073Duplicated1625.9933.0XP_074615367.1histone-lysine N-methyltransferase NSD2JBrowse
76471at6073Duplicated1455.1826.0XP_074615368.1histone-lysine N-methyltransferase NSD2JBrowse
76477at6073Complete818.8509.0XP_074633088.1UBX domain-containing protein 7JBrowse
76480at6073Complete566.7369.0XP_074626842.1DDB1- and CUL4-associated factor 10JBrowse
76484at6073Complete1847.61145.0XP_074633525.1serine/threonine-protein kinase SIK3-likeJBrowse
76490at6073Complete554.3371.0XP_074638365.1protein Njmu-R1-likeJBrowse
76492at6073Complete715.7442.0XP_074613974.1UBX domain-containing protein 6-likeJBrowse
76494at6073Complete608.5381.0XP_074610891.1F-box only protein 4-likeJBrowse
76499at6073Duplicated348.1222.0XP_074615649.1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
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