BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
9703at6073Fragmented369.7291.0aint_s0140.g6.t1serine/threonine-protein kinase Nek11JBrowse
9733at6073Complete217.0187.0aint_s0475.g18.t1cyclin-dependent kinase inhibitor 1-likeJBrowse
9775at6073Fragmented565.3235.0aint_s0210.g23.t1MAP/microtubule affinity-regulating kinase 3-likeJBrowse
9777at6073Complete798.2400.0aint_s3062.g1.t1Protein farnesyltransferase subunit betaJBrowse
9852at6073Complete760.2333.0aint_s0001.g158.t3solute carrier family 35 member E2A-likeJBrowse
9931at6073Complete645.8408.0aint_s0346.g12.t4nuclear-interacting partner of ALKJBrowse
9934at6073Complete818.3463.0aint_s0445.g3.t1Alpha-(1,3)-fucosyltransferase 10JBrowse
9941at6073Duplicated276.2173.0aint_s0168.g3.t1uncharacterized protein LOC130613352 isoform X1JBrowse
9941at6073Duplicated276.2173.0aint_s0168.g3.t2uncharacterized protein LOC130613352 isoform X1JBrowse
9964at6073Duplicated2603.01599.0aint_s0159.g24.t1GREB1-like proteinJBrowse
9964at6073Duplicated2602.91599.0aint_s0159.g24.t2GREB1-like proteinJBrowse
10077at6073Complete770.8467.0aint_s0313.g16.t1serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit BJBrowse
10157at6073Complete395.6228.0aint_s0010.g83.t1uncharacterized protein LOC124809034JBrowse
10181at6073Complete302.0241.0aint_s0327.g10.t1uncharacterized protein LOC116286471JBrowse
10192at6073Fragmented426.1210.0aint_s0083.g76.t1V-type proton ATPase subunit HJBrowse
10196at6073Complete356.2220.0aint_s0116.g40.t1trimeric intracellular cation channel typeJBrowse
10225at6073Complete298.3202.0aint_s0035.g39.t1nucleoside diphosphate-linked moiety X motif 8-likeJBrowse
10231at6073Complete1019.4623.0aint_s0065.g6.t1alkylated DNA repair protein alkB homolog 8-likeJBrowse
10260at6073Complete925.8492.0aint_s0056.g51.t1probable aminopeptidase NPEPL1JBrowse
10283at6073Complete1193.8613.0aint_s0087.g16.t1solute carrier organic anion transporter family member 4A1-likeJBrowse
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