BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6483at6073Duplicated2164.8965.0XP_074621954.1UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6483at6073Duplicated2163.2965.0XP_074621953.1UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunitJBrowse
6500at6073Complete694.4435.0XP_074610227.1uncharacterized protein LOC110045530 isoform X1JBrowse
6511at6073Complete1413.4814.0XP_074634188.1anion exchange protein 2-likeJBrowse
6528at6073Complete454.5236.0XP_074620365.1E3 ubiquitin-protein ligase MARCHF1-likeJBrowse
6530at6073Complete355.6233.0XP_074624765.1sex-determining region Y proteinJBrowse
6591at6073Complete570.8309.0XP_074636387.1citramalyl-CoA lyase, mitochondrial-likeJBrowse
6600at6073Complete1266.9782.0XP_074637874.1cytosolic endo-beta-N-acetylglucosaminidase-likeJBrowse
6672at6073Complete519.1257.0XP_074638369.1probable tRNA(His) guanylyltransferaseJBrowse
6674at6073Complete1683.7775.0XP_074639257.1AconitaseJBrowse
6686at6073Complete298.3256.0XP_074636444.1transmembrane protein 248JBrowse
6716at6073Complete177.099.0XP_074637556.1Small integral membrane protein 14JBrowse
6727at6073Complete408.0220.0XP_074623844.1Radial spoke head 1JBrowse
6767at6073Complete175.699.0XP_074623108.110 kda heat shock proteinJBrowse
6833at6073Complete282.8181.0XP_074607607.1AP-5 complex subunit sigma-1JBrowse
6836at6073Complete889.0506.0XP_074620765.1ATP-dependent RNA helicase DDX41JBrowse
6883at6073Complete654.7432.0XP_074616661.1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Complete375.1249.0XP_074608462.1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Duplicated719.7418.0XP_074626463.1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6947at6073Duplicated676.4383.0XP_074626464.1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
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