BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6767at6073Duplicated176.499.0ENSORFP00005011268.110 kda heat shock proteinJBrowse
6767at6073Duplicated176.499.0ENSORFP00005043623.110 kda heat shock proteinJBrowse
6833at6073Duplicated262.9181.0ENSORFP00005019737.1AP-5 complex subunit sigma-1JBrowse
6833at6073Duplicated247.2181.0ENSORFP00005019719.1AP-5 complex subunit sigma-1JBrowse
6836at6073Duplicated853.6494.0ENSORFP00005034175.1ATP-dependent RNA helicase DDX41JBrowse
6836at6073Duplicated842.3452.0ENSORFP00005034180.1ATP-dependent RNA helicase DDX41JBrowse
6883at6073Complete598.6422.0ENSORFP00005027991.1Neurotransmitter-gated ion-channel ligand-binding domainJBrowse
6910at6073Complete363.9215.0ENSORFP00005025966.1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Complete675.0418.0ENSORFP00005021330.1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6963at6073Complete280.1251.0ENSORFP00005017730.1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6965at6073Duplicated376.6268.0ENSORFP00005017798.1Histidine protein methyltransferase 1JBrowse
6965at6073Duplicated336.6268.0ENSORFP00005017808.1Histidine protein methyltransferase 1JBrowse
6970at6073Duplicated903.4440.0ENSORFP00005002647.1ribosomal protein S6 kinase beta-1JBrowse
6970at6073Duplicated894.9440.0ENSORFP00005002638.1ribosomal protein S6 kinase beta-1JBrowse
6970at6073Duplicated860.0409.0ENSORFP00005002622.1ribosomal protein S6 kinase beta-1JBrowse
6971at6073Complete416.5600.0ENSORFP00005026877.1uncharacterized protein LOC116290996JBrowse
6982at6073Complete445.7256.0ENSORFP00005016343.1alkaline ceramidase 3JBrowse
6986at6073Complete1124.8541.0ENSORFP00005008316.1EH domain-containing protein 3JBrowse
7017at6073Complete511.2404.0ENSORFP00005022802.1zinc finger protein 503JBrowse
7023at6073Complete402.8360.0ENSORFP00005013730.1serine proteaseJBrowse
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