BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76499at6073Duplicated348.1222.0XP_074615650.1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76499at6073Duplicated348.1222.0XP_074615651.1LHFPL tetraspan subfamily member 2a protein-likeJBrowse
76502at6073Complete1013.3619.0XP_074613520.1uncharacterized protein LOC116292841JBrowse
76504at6073Duplicated1343.7862.0XP_074621563.1protein inturned-likeJBrowse
76504at6073Duplicated1356.2860.0XP_074621558.1protein inturned-likeJBrowse
76504at6073Duplicated1354.9856.0XP_074621559.1protein inturned-likeJBrowse
76504at6073Duplicated1354.9856.0XP_074621560.1protein inturned-likeJBrowse
76504at6073Duplicated1354.9856.0XP_074621561.1protein inturned-likeJBrowse
76504at6073Duplicated1354.9856.0XP_074621562.1protein inturned-likeJBrowse
76504at6073Duplicated1263.3790.0XP_074621564.1protein inturned-likeJBrowse
76516at6073Duplicated813.0544.0XP_074616627.1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76516at6073Duplicated722.9493.0XP_074616628.1DEAD-box ATP-dependent RNA helicase 22-likeJBrowse
76519at6073Complete1004.7626.0XP_074614510.1E3 ubiquitin-protein ligase RNF103JBrowse
76525at6073Duplicated656.9430.0XP_074622212.1glucocorticoid-induced transcript 1 protein-likeJBrowse
76525at6073Duplicated653.4430.0XP_074622209.1glucocorticoid-induced transcript 1 protein-likeJBrowse
76525at6073Duplicated653.4430.0XP_074622210.1glucocorticoid-induced transcript 1 protein-likeJBrowse
76525at6073Duplicated653.4430.0XP_074622211.1glucocorticoid-induced transcript 1 protein-likeJBrowse
76527at6073Complete1113.0683.0XP_074606524.1neurogenic locus notch homolog protein 1-likeJBrowse
76533at6073Complete552.2382.0XP_074621266.1Charged multivesicular body protein 7JBrowse
76536at6073Duplicated1213.8816.0XP_074618614.1transcription initiation factor TFIID subunit 4JBrowse
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