BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76617at6073Duplicated609.3394.0XP_074626043.1all trans-polyprenyl-diphosphate synthase PDSS2-likeJBrowse
76617at6073Duplicated537.1322.0XP_074626044.1all trans-polyprenyl-diphosphate synthase PDSS2-likeJBrowse
76618at6073Complete2251.41479.0XP_074624937.1mitogen-activated protein kinase kinase kinase 4-likeJBrowse
76619at6073Duplicated529.5382.0XP_074606118.1cerebellar degeneration-related protein 2-likeJBrowse
76619at6073Duplicated542.8378.0XP_074606116.1cerebellar degeneration-related protein 2-likeJBrowse
76625at6073Complete917.6566.0XP_074629199.12',5'-phosphodiesterase 12JBrowse
76626at6073Complete481.8343.0XP_074634959.1vacuolar protein sorting-associated protein 37AJBrowse
76629at6073Complete577.4290.0XP_074637648.1ubiquitin recognition factor in ER-associated degradation protein 1JBrowse
76633at6073Duplicated2128.51411.0XP_074618050.1putative ATP-dependent RNA helicase TDRD12JBrowse
76633at6073Duplicated2107.11411.0XP_074618049.1putative ATP-dependent RNA helicase TDRD12JBrowse
76641at6073Complete966.1733.0XP_074633712.1UV radiation resistance-associated protein-likeJBrowse
76646at6073Complete454.5306.0XP_074633190.1WD repeat-containing protein 53JBrowse
76648at6073Duplicated406.0290.0XP_074632066.1consortin-likeJBrowse
76648at6073Duplicated366.4261.0XP_074632067.1consortin-likeJBrowse
76650at6073Duplicated773.1536.0XP_074626121.1biotin--protein ligaseJBrowse
76650at6073Duplicated771.2536.0XP_074626122.1biotin--protein ligaseJBrowse
76651at6073Complete765.3449.0XP_074629156.1la-related protein 6JBrowse
76659at6073Complete1021.0646.0XP_074616136.1DNA mismatch repair Msh2-likeJBrowse
76664at6073Duplicated6148.94184.0XP_074620755.1fat-like cadherin-related tumor suppressor homologJBrowse
76664at6073Duplicated6148.94184.0XP_074620756.1fat-like cadherin-related tumor suppressor homologJBrowse
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