BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76714at6073Duplicated1004.3682.0XP_074635788.1LON peptidase N-terminal domain and RING finger 3JBrowse
76720at6073Complete1059.4792.0XP_074619013.1rDNA transcriptional regulator pol5-likeJBrowse
76721at6073Complete750.0547.0XP_074617926.1uncharacterized protein LOC116294853JBrowse
76734at6073Complete633.5397.0XP_074621308.1RING finger protein 150JBrowse
76737at6073Duplicated521.9327.0XP_074621172.1histone PARylation factor 1JBrowse
76737at6073Duplicated506.1326.0XP_074621171.1histone PARylation factor 1JBrowse
76744at6073Complete996.1482.0XP_074614021.1mothers against decapentaplegic homolog 4JBrowse
76758at6073Complete309.1204.0XP_074622420.1uncharacterized protein C1orf146-likeJBrowse
76773at6073Complete232.2138.0XP_074608512.1transmembrane protein 18JBrowse
76775at6073Complete502.7329.0XP_074626822.1Xyloside xylosyltransferase 1JBrowse
76776at6073Complete405.6271.0XP_074623776.1transcription termination factor 3, mitochondrial-likeJBrowse
76778at6073Complete735.5447.0XP_074623043.1malate dehydrogenase 1BJBrowse
76787at6073Duplicated938.3562.0XP_074619185.1Far upstream element-binding protein 3JBrowse
76787at6073Duplicated904.4562.0XP_074619170.1Far upstream element-binding protein 3JBrowse
76787at6073Duplicated891.0562.0XP_074619180.1Far upstream element-binding protein 3JBrowse
76788at6073Complete530.7325.0XP_074619413.1hsc70-interacting proteinJBrowse
76791at6073Complete667.1442.0XP_074636391.1sedoheptulokinase-likeJBrowse
76792at6073Complete611.7375.0XP_074616417.1STAM-binding protein-likeJBrowse
76797at6073Duplicated899.8650.0XP_074636695.1nuclear pore complex protein Nup88-likeJBrowse
76797at6073Duplicated899.3650.0XP_074636694.1nuclear pore complex protein Nup88-likeJBrowse
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