BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76797at6073Duplicated896.4650.0XP_074636696.1nuclear pore complex protein Nup88-likeJBrowse
76805at6073Duplicated505.6379.0XP_074617613.1uncharacterized protein LOC130614738 isoform X1JBrowse
76805at6073Duplicated503.7379.0XP_074617614.1uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Complete841.5457.0XP_074635687.1pectin acetylesterase 5JBrowse
76835at6073Complete674.0465.0XP_074609215.1RNA polymerase II-associated protein 3JBrowse
76836at6073Complete820.6682.0XP_074609158.1general transcription factor 3C polypeptide 4JBrowse
76840at6073Complete653.0440.0XP_074617545.1SHC-transforming protein 1JBrowse
76843at6073Complete413.6274.0XP_074621111.1leucine-rich repeat-containing protein 59JBrowse
76846at6073Duplicated2516.31656.0XP_074608799.1gamma-tubulin complex component 6JBrowse
76846at6073Duplicated2172.41508.0XP_074608800.1gamma-tubulin complex component 6JBrowse
76853at6073Complete1835.21216.0XP_074611105.1RB1-inducible coiled-coil protein 1JBrowse
76855at6073Complete498.1319.0XP_074624904.1Protein kinase C and casein kinase substrate in neuronsJBrowse
76861at6073Complete687.6425.0XP_074635219.1probable protein phosphatase 2C 21JBrowse
76864at6073Complete267.2206.0XP_074608056.1meiotic recombination protein REC114JBrowse
76869at6073Duplicated609.0405.0XP_074626849.1FGFR1 oncogene partnerJBrowse
76869at6073Duplicated601.6405.0XP_074626848.1FGFR1 oncogene partnerJBrowse
76873at6073Duplicated1951.11115.0XP_074615444.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1951.11115.0XP_074615445.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1948.01115.0XP_074615446.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1932.91115.0XP_074615447.1Zinc finger MIZ domain-containing protein 1JBrowse
Go to page: of 238 pages
TOP