BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76873at6073Duplicated1918.11084.0XP_074615448.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1918.11084.0XP_074615449.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1918.11084.0XP_074615450.1Zinc finger MIZ domain-containing protein 1JBrowse
76873at6073Duplicated1909.91075.0XP_074615451.1Zinc finger MIZ domain-containing protein 1JBrowse
76877at6073Complete705.5481.0XP_074637818.1ankyrin repeat and LEM domain-containing protein 1JBrowse
76878at6073Complete668.5368.0XP_074635436.1signal peptide peptidase-like 3JBrowse
76879at6073Duplicated1294.5853.0XP_074638076.1leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76879at6073Duplicated1200.9776.0XP_074638077.1leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76879at6073Duplicated1200.9776.0XP_074638078.1leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1JBrowse
76889at6073Complete1415.01004.0XP_074638256.1testis-expressed protein 2JBrowse
76894at6073Complete854.7621.0XP_074635709.1serine/threonine-protein kinase unc-51JBrowse
76896at6073Duplicated550.8433.0XP_074639190.1protein tweety homolog 2-likeJBrowse
76896at6073Duplicated518.7399.0XP_074605954.1protein tweety homolog 2-likeJBrowse
76901at6073Complete785.8565.0XP_074617951.1uncharacterized protein KIAA2013 homologJBrowse
76905at6073Duplicated464.2312.0XP_074619193.1zinc finger protein GLI2-likeJBrowse
76905at6073Duplicated464.2312.0XP_074619194.1zinc finger protein GLI2-likeJBrowse
76914at6073Complete575.7409.0XP_074627248.1E3 ubiquitin-protein ligase TRAIPJBrowse
76915at6073Duplicated1192.9813.0XP_074616693.1WD repeat-containing protein 47JBrowse
76915at6073Duplicated1190.4813.0XP_074616690.1WD repeat-containing protein 47JBrowse
76922at6073Complete571.1337.0XP_074630572.1UBX domain-containing protein 1JBrowse
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