BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76925at6073Duplicated2345.81494.0XP_074622986.1uncharacterized protein LOC116302959JBrowse
76925at6073Duplicated2345.81494.0XP_074622987.1uncharacterized protein LOC116302959JBrowse
76928at6073Complete326.4215.0XP_074637369.1E3 ubiquitin-protein ligase march2JBrowse
76929at6073Complete217.0165.0XP_074620003.1non-histone chromosomal protein 6JBrowse
76930at6073Duplicated980.8722.0XP_074618685.1DNA replication factor Cdt1JBrowse
76930at6073Duplicated979.9722.0XP_074618684.1DNA replication factor Cdt1JBrowse
76935at6073Complete240.4171.0XP_074625602.1uncharacterized protein LOC110236280 isoform X1JBrowse
76938at6073Complete749.7456.0XP_074638923.1ELMO domain-containing protein 3JBrowse
76943at6073Complete281.3161.0XP_074625523.1Zinc finger MYND domain-containing protein 11JBrowse
76945at6073Duplicated399.7254.0XP_074613920.1Kv channel-interacting 1JBrowse
76945at6073Duplicated374.5240.0XP_074613919.1Kv channel-interacting 1JBrowse
76945at6073Duplicated378.5218.0XP_074613924.1Kv channel-interacting 1JBrowse
76945at6073Duplicated352.9204.0XP_074613922.1Kv channel-interacting 1JBrowse
76948at6073Duplicated532.0360.0XP_074635953.1coiled-coil domain-containing protein 92JBrowse
76948at6073Duplicated528.3360.0XP_074635955.1coiled-coil domain-containing protein 92JBrowse
76966at6073Complete412.3286.0XP_074632535.1E2F-associated phosphoprotein-likeJBrowse
76990at6073Duplicated816.0589.0XP_074625187.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76990at6073Duplicated815.7588.0XP_074625188.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Complete699.0438.0XP_074620813.1glycerate kinase-likeJBrowse
76993at6073Complete709.9506.0XP_074611345.1afadin- and alpha-actinin-binding protein B-likeJBrowse
Go to page: of 238 pages
TOP