BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77082at6073Complete432.6275.0XP_074625037.1uncharacterized protein LOC116292340JBrowse
77087at6073Complete594.6393.0XP_074617634.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77088at6073Complete1230.0786.0XP_074635353.12 -5 -oligoadenylate synthase 1JBrowse
77089at6073Complete1064.8868.0XP_074626118.1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Complete627.6424.0XP_074615599.1nucleotide exchange factor SIL1JBrowse
77093at6073Complete296.4180.0XP_074613106.1tetratricopeptide repeat protein 33JBrowse
77095at6073Complete700.2433.0XP_074614589.1DNA cross-link repair 1AJBrowse
77101at6073Complete1019.6662.0XP_074616626.1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Complete992.5709.0XP_074636527.1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77114at6073Duplicated1363.8970.0XP_074606928.1folliculin-interacting protein 1JBrowse
77114at6073Duplicated1340.0950.0XP_074606927.1folliculin-interacting protein 1JBrowse
77114at6073Duplicated1282.0892.0XP_074606929.1folliculin-interacting protein 1JBrowse
77115at6073Complete737.6432.0XP_074630981.1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Duplicated167.9114.0XP_074615919.1nucleolar and coiled-body phosphoprotein 1JBrowse
77134at6073Duplicated165.7114.0XP_074615920.1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete637.4413.0XP_074636005.1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Duplicated816.8571.0XP_074627257.1kinetochore protein NDC80 homologJBrowse
77148at6073Duplicated814.9571.0XP_074627258.1kinetochore protein NDC80 homologJBrowse
77163at6073Complete670.1448.0XP_074619554.1coiled-coil domain-containing protein 138JBrowse
77166at6073Complete567.9410.0XP_074624941.1forkhead box protein J3-likeJBrowse
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