BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
10348at6073Complete321.0178.0aint_s0108.g20.t1Pancreas transcription factor 1 subunit alphaJBrowse
10369at6073Complete444.2218.0aint_s0271.g5.t1nucleoside diphosphate kinase homolog 5JBrowse
10403at6073Duplicated1228.0698.0aint_s0415.g14.t1Serine/threonine-protein kinase sik2JBrowse
10403at6073Duplicated1228.0698.0aint_s0415.g14.t2Serine/threonine-protein kinase sik2JBrowse
10404at6073Fragmented3134.91433.0aint_s0047.g67.t1CCR4-NOT transcription complex subunit 1JBrowse
10411at6073Complete502.1320.0aint_s0034.g8.t1CST complex subunit STN1-likeJBrowse
10422at6073Complete551.3343.0aint_s0120.g39.t1activating signal cointegrator 1 complex subunitJBrowse
10506at6073Complete583.3351.0aint_s0010.g73.t1LIM/homeobox protein Lhx1-likeJBrowse
10512at6073Complete491.0252.0aint_s0696.g11.t1plasmanylethanolamine desaturaseJBrowse
10571at6073Complete580.4387.0aint_s0247.g30.t1suppressor APC domain-containing protein 2-likeJBrowse
10748at6073Duplicated591.1321.0aint_s0169.g41.t2cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
10748at6073Duplicated563.8321.0aint_s0169.g41.t1cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
10802at6073Complete401.9209.0aint_s0482.g6.t1inhibitor of growth protein 5-likeJBrowse
10822at6073Complete342.1191.0aint_s0017.g33.t1hematopoietically-expressed homeobox protein hhexJBrowse
10935at6073Complete304.0239.0aint_s0010.g3.t1uncharacterized protein LOC114960186JBrowse
10942at6073Complete465.7282.0aint_s0015.g92.t1hsp70-binding protein 1JBrowse
10960at6073Fragmented818.3448.0aint_s0015.g49.t1collagen type IV alpha-3-binding proteinJBrowse
10961at6073Complete1013.3509.0aint_s0124.g13.t1amidophosphoribosyltransferaseJBrowse
10963at6073Fragmented293.5200.0aint_s0002.g147.t1archaemetzincin-2JBrowse
10990at6073Complete801.2461.0aint_s0229.g11.t1stabilizer of axonemal microtubules 2JBrowse
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