BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
10157at6073Complete396.0228.0alor_g11117.t1uncharacterized protein LOC124809034JBrowse
10181at6073Fragmented248.4142.0alor_g22279.t1uncharacterized protein LOC116286471JBrowse
10192at6073Complete815.5441.0alor_g6890.t1V-type proton ATPase subunit HJBrowse
10196at6073Complete390.9243.0alor_g11999.t1trimeric intracellular cation channel typeJBrowse
10202at6073Complete1025.8510.0alor_g9653.t1Importin subunit alpha-3JBrowse
10213at6073Complete265.0161.0alor_g11221.t1CB1 cannabinoid receptor-interacting protein 1JBrowse
10225at6073Complete278.5174.0alor_g6293.t1nucleoside diphosphate-linked moiety X motif 8-likeJBrowse
10231at6073Complete1004.6623.0alor_g25232.t1alkylated DNA repair protein alkB homolog 8-likeJBrowse
10260at6073Complete926.3492.0alor_g7515.t1probable aminopeptidase NPEPL1JBrowse
10283at6073Complete1193.9615.0alor_g13582.t1solute carrier organic anion transporter family member 4A1-likeJBrowse
10348at6073Complete308.5165.0alor_g16352.t1Pancreas transcription factor 1 subunit alphaJBrowse
10369at6073Complete442.3218.0alor_g22023.t1nucleoside diphosphate kinase homolog 5JBrowse
10403at6073Complete1228.8698.0alor_g13782.t1Serine/threonine-protein kinase sik2JBrowse
10404at6073Complete4396.12251.0alor_g1796.t1CCR4-NOT transcription complex subunit 1JBrowse
10411at6073Complete460.8302.0alor_g23094.t1CST complex subunit STN1-likeJBrowse
10422at6073Complete541.5340.0alor_g24152.t1activating signal cointegrator 1 complex subunitJBrowse
10506at6073Complete583.3351.0alor_g11106.t1LIM/homeobox protein Lhx1-likeJBrowse
10512at6073Complete467.5242.0alor_g10165.t1plasmanylethanolamine desaturaseJBrowse
10571at6073Complete579.3387.0alor_g136.t1suppressor APC domain-containing protein 2-likeJBrowse
10748at6073Fragmented420.8244.0alor_g11161.t1cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
Go to page: of 167 pages
TOP