BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6963at6073Duplicated336.7251.0XP_074639471.1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6963at6073Duplicated290.2224.0XP_074639472.1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6965at6073Complete448.0297.0XP_074639467.1Histidine protein methyltransferase 1JBrowse
6970at6073Duplicated927.0463.0XP_074635298.1ribosomal protein S6 kinase beta-1JBrowse
6970at6073Duplicated878.9412.0XP_074635299.1ribosomal protein S6 kinase beta-1JBrowse
6971at6073Complete725.1696.0XP_074626379.1uncharacterized protein LOC116290996JBrowse
6982at6073Complete437.8262.0XP_074633550.1alkaline ceramidase 3JBrowse
6986at6073Complete1110.2539.0XP_074628524.1EH domain-containing protein 3JBrowse
7017at6073Complete529.6404.0XP_074607680.1zinc finger protein 503JBrowse
7018at6073Complete575.4391.0XP_074624132.1synaptosomal-associated protein 47JBrowse
7023at6073Complete508.0371.0XP_074631543.1serine proteaseJBrowse
7030at6073Duplicated464.5260.0XP_074630427.150S ribosomal protein L4-likeJBrowse
7030at6073Duplicated464.2260.0XP_074630426.150S ribosomal protein L4-likeJBrowse
7035at6073Complete1135.3685.0XP_074623430.1tRNA wybutosine-synthesizing protein 4JBrowse
7131at6073Complete294.7178.0XP_074612187.1ADP-ribosylation factor 16JBrowse
7189at6073Complete842.7527.0XP_074623029.1double-stranded RNA-specific editase 1JBrowse
7225at6073Duplicated678.3397.0XP_074612068.1uncharacterized protein LOC116299609JBrowse
7225at6073Duplicated678.3397.0XP_074612075.1uncharacterized protein LOC116299609JBrowse
7225at6073Duplicated678.3397.0XP_074612083.1uncharacterized protein LOC116299609JBrowse
7235at6073Duplicated1580.0882.0XP_074614130.1phospholipase D1-likeJBrowse
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