BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11629at6073Complete273.7208.0HOLI01462.G880540S ribosomal proteinJBrowse
11698at6073Complete498.4317.0HOLI00130.G5148WD repeat-containing protein 55JBrowse
11802at6073Fragmented662.0375.0HOLI01446.G12559mitochondrial-processing peptidase subunit alphaJBrowse
11834at6073Complete331.5210.0HOLI00312.G41394UPF0428 protein CXorf56JBrowse
11852at6073Complete168.9120.0HOLI02409.G420328S ribosomal protein S6, mitochondrial-likeJBrowse
11858at6073Complete675.1327.0HOLI00054.G23836Casein kinase II subunit alphaJBrowse
11940at6073Fragmented229.6130.0HOLI01467.G13663solute carrier family 35 member E3-likeJBrowse
11943at6073Complete698.6543.0HOLI01732.G22831TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
12015at6073Complete633.4463.0HOLI00251.G8876DNA-(apurinic or apyrimidinic site) endonuclease 2JBrowse
12054at6073Duplicated231.5134.0HOLI03085.G8115glutaredoxin-related 5, mitochondrialJBrowse
12054at6073Duplicated230.3132.0HOLI03519.G9071glutaredoxin-related 5, mitochondrialJBrowse
12093at6073Complete1132.6686.0HOLI00919.G13912tyrosine-protein kinase HTK16JBrowse
12106at6073Fragmented419.0370.0HOLI01499.G59747GATA-binding factor 2-likeJBrowse
12121at6073Complete257.3330.0HOLI01168.G16597Ectonucleoside triphosphate diphosphohydrolase 5JBrowse
12142at6073Complete475.9256.0HOLI00914.G56334Golgi phosphoprotein 3-likeJBrowse
12222at6073Fragmented376.4241.0HOLI02186.G28789MORN repeat-containing protein 1JBrowse
12286at6073Complete1124.11019.0HOLI00038.G44318integrinJBrowse
12343at6073Complete525.6368.0HOLI00635.G45005UPF0415 protein C7orf25JBrowse
12353at6073Complete1090.9736.0HOLI03597.G43679probable E3 ubiquitin-protein ligase HECTD2JBrowse
12355at6073Complete801.5341.0HOLI00117.G2587uncharacterized protein LOC131786110 isoform X1JBrowse
Go to page: of 152 pages
TOP