BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77171at6073Duplicated402.8287.0XP_074635890.1transcriptional regulator Myc-1-likeJBrowse
77171at6073Duplicated402.8287.0XP_074635891.1transcriptional regulator Myc-1-likeJBrowse
77171at6073Duplicated402.8287.0XP_074635894.1transcriptional regulator Myc-1-likeJBrowse
77172at6073Duplicated455.9307.0XP_074619129.1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77172at6073Duplicated419.8289.0XP_074619130.1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
77177at6073Complete485.9323.0XP_074617242.1HAUS augmin-like complex subunit 4JBrowse
77182at6073Complete350.5267.0XP_074615321.1transcription initiation factor IIA subunit 1JBrowse
77184at6073Duplicated927.1566.0XP_074619150.1transcriptional protein SWT1-likeJBrowse
77184at6073Duplicated927.1566.0XP_074619151.1transcriptional protein SWT1-likeJBrowse
77184at6073Duplicated927.1566.0XP_074619152.1transcriptional protein SWT1-likeJBrowse
77192at6073Complete404.8268.0XP_074613612.1HAUS augmin-like complex subunit 1JBrowse
77195at6073Complete372.2317.0XP_074619576.1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Complete392.2236.0XP_074631266.1reticulon-1-AJBrowse
77200at6073Complete656.6515.0XP_074631702.1scaffold protein salvador-likeJBrowse
77208at6073Complete694.7449.0XP_074636701.1ribonuclease IIIJBrowse
77217at6073Complete371.9252.0XP_074638603.1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Complete405.9271.0XP_074617908.1uncharacterized protein LOC114517244JBrowse
77225at6073Complete3169.22160.0XP_074620911.1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Duplicated758.1443.0XP_074623641.1ETS translocation variant 1JBrowse
77227at6073Duplicated675.8388.0XP_074623642.1ETS translocation variant 1JBrowse
Go to page: of 238 pages
TOP