BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77228at6073Complete439.5305.0XP_074611841.1transcription factor AP-1-likeJBrowse
77240at6073Duplicated1066.0777.0XP_074614898.1protein PAT1 homolog 1JBrowse
77240at6073Duplicated1059.2777.0XP_074614899.1protein PAT1 homolog 1JBrowse
77246at6073Complete463.1361.0XP_074635607.1Stromal membrane-associated protein 1JBrowse
77250at6073Duplicated1273.7891.0XP_074635811.1rab GTPase-binding effector protein 1JBrowse
77250at6073Duplicated1129.0758.0XP_074635812.1rab GTPase-binding effector protein 1JBrowse
77264at6073Complete1075.9756.0XP_074617155.1RNA-binding protein 28JBrowse
77273at6073Duplicated2524.11559.0XP_074627468.1androglobin-likeJBrowse
77273at6073Duplicated2524.11559.0XP_074627476.1androglobin-likeJBrowse
77273at6073Duplicated2524.11559.0XP_074627477.1androglobin-likeJBrowse
77273at6073Duplicated2522.61559.0XP_074627467.1androglobin-likeJBrowse
77273at6073Duplicated2522.61559.0XP_074627469.1androglobin-likeJBrowse
77273at6073Duplicated2522.61559.0XP_074627471.1androglobin-likeJBrowse
77273at6073Duplicated2412.91502.0XP_074627472.1androglobin-likeJBrowse
77273at6073Duplicated2412.91502.0XP_074627473.1androglobin-likeJBrowse
77273at6073Duplicated2412.91502.0XP_074627474.1androglobin-likeJBrowse
77273at6073Duplicated2412.91502.0XP_074627475.1androglobin-likeJBrowse
77285at6073Duplicated155.1110.0XP_074617107.139S ribosomal protein L52, mitochondrial-likeJBrowse
77285at6073Duplicated155.1110.0XP_074617108.139S ribosomal protein L52, mitochondrial-likeJBrowse
77287at6073Complete191.1151.0XP_074608103.1uncharacterized protein LOC110238137JBrowse
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