BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77382at6073Duplicated296.9230.0XP_074632579.1eukaryotic translation initiation factor 3 subunit JJBrowse
77383at6073Complete471.5305.0XP_074612583.1probable rRNA-processing protein EBP2JBrowse
77386at6073Duplicated299.2283.0XP_074624473.1G kinase-anchoring protein 1JBrowse
77386at6073Duplicated299.0283.0XP_074624466.1G kinase-anchoring protein 1JBrowse
77389at6073Complete639.8519.0XP_074614014.1Peroxisome proliferator-activated receptor gamma coactivator-related 1JBrowse
77391at6073Complete832.6531.0XP_074627309.1Cleavage stimulation factor subunit 2JBrowse
77400at6073Duplicated456.9352.0XP_074609655.1forkhead box protein P1-likeJBrowse
77400at6073Duplicated456.5352.0XP_074609653.1forkhead box protein P1-likeJBrowse
77400at6073Duplicated456.5352.0XP_074609654.1forkhead box protein P1-likeJBrowse
77400at6073Duplicated456.4352.0XP_074609651.1forkhead box protein P1-likeJBrowse
77400at6073Duplicated456.2352.0XP_074609652.1forkhead box protein P1-likeJBrowse
77410at6073Complete1289.9970.0XP_074631096.1nuclear exosome regulator NRDE2JBrowse
77414at6073Complete605.3411.0XP_074606311.1Myelin expression factor 2JBrowse
77415at6073Complete386.2254.0XP_074623138.1ELL-associated factor 1JBrowse
77417at6073Complete554.6454.0XP_074635840.1BICD family-like cargo adapter 1JBrowse
77426at6073Duplicated1183.5678.0XP_074622889.1enhancer of polycomb homolog 1JBrowse
77426at6073Duplicated1181.9678.0XP_074622890.1enhancer of polycomb homolog 1JBrowse
77435at6073Complete457.4333.0XP_074635376.1nuclear cap-binding protein subunit 3JBrowse
77439at6073Complete1122.7776.0XP_074636829.1coiled-coil domain-containing protein 178JBrowse
77448at6073Complete330.9255.0XP_074611703.1Cleavage inducing molecular chaperoneJBrowse
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