BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77456at6073Duplicated1386.7823.0XP_074613981.1MYCBP-associated proteinJBrowse
77456at6073Duplicated1375.5823.0XP_074613982.1MYCBP-associated proteinJBrowse
77470at6073Complete602.5398.0XP_074622618.1cyclic AMP-dependent transcription factor ATF-2JBrowse
77476at6073Complete621.6576.0XP_074623155.1uncharacterized protein LOC116293469JBrowse
77495at6073Complete850.1509.0XP_074636538.1cilia- and flagella-associated protein 53JBrowse
77496at6073Complete1043.3799.0XP_074639001.1caskin-2JBrowse
77499at6073Complete818.2486.0XP_074612341.1AN1-type zinc finger protein 4JBrowse
77502at6073Complete553.2321.0XP_074618094.1Peptidyl-prolyl cis-trans isomeraseJBrowse
77505at6073Duplicated1034.8670.0XP_074632806.1HAUS augmin-like complex subunit 5JBrowse
77505at6073Duplicated1034.8670.0XP_074632807.1HAUS augmin-like complex subunit 5JBrowse
77505at6073Duplicated1034.8670.0XP_074632808.1HAUS augmin-like complex subunit 5JBrowse
77509at6073Complete1486.51118.0XP_074625827.1uncharacterized protein KIAA0825-likeJBrowse
77510at6073Complete1055.5671.0XP_074636624.1trichohyalinJBrowse
77513at6073Complete448.0321.0XP_074632560.1replication stress response regulator SDE2JBrowse
77521at6073Complete547.8421.0XP_074614118.1uncharacterized protein LOC114524962JBrowse
77523at6073Duplicated443.7311.0XP_074637613.1RILP-like protein 1JBrowse
77523at6073Duplicated443.7311.0XP_074637614.1RILP-like protein 1JBrowse
77523at6073Duplicated443.7311.0XP_074637616.1RILP-like protein 1JBrowse
77525at6073Complete924.5614.0XP_074611983.1nucleoporin NDC1-likeJBrowse
77527at6073Complete516.0303.0XP_074627464.1protein FAM76A-likeJBrowse
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