BUSCO Gene Details in Acropora spathulata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora spathulataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 96.9% [S: 46.6%, D: 50.4%] F: 1.7%, M: 1.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,105 (96.9%)1,492 (46.6%)1,613 (50.4%)55 (1.7%)43 (1.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora spathulata: 5,412 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75525at6073Complete340.2211.0ENSEWQP00005008008.1sugar transporter SWEET1-likeJBrowse
75533at6073Duplicated476.8286.0ENSEWQP00005001262.1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75533at6073Duplicated428.9249.0ENSEWQP00005001259.1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75536at6073Duplicated1278.0791.0ENSEWQP00005039038.1transcriptional repressor NF-X1-likeJBrowse
75536at6073Duplicated1277.9791.0ENSEWQP00005039030.1transcriptional repressor NF-X1-likeJBrowse
75542at6073Complete2684.43603.0ENSEWQP00005040538.1protocadherin-like proteinJBrowse
75557at6073Duplicated1021.7587.0ENSEWQP00005040951.1grainyhead-like protein 1 homologJBrowse
75557at6073Duplicated1008.2587.0ENSEWQP00005040965.1grainyhead-like protein 1 homologJBrowse
75561at6073Complete415.1214.0ENSEWQP00005020370.1zinc finger CCHC domain-containing protein 24JBrowse
75562at6073Complete624.1328.0ENSEWQP00005022459.1dnaJ homolog subfamily C member 25 homologJBrowse
75566at6073Duplicated1329.7721.0ENSEWQP00005022649.1osmotic avoidance abnormal protein 3-likeJBrowse
75566at6073Duplicated1240.1721.0ENSEWQP00005022634.1osmotic avoidance abnormal protein 3-likeJBrowse
75568at6073Duplicated1774.31073.0ENSEWQP00005014798.1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75568at6073Duplicated1644.7923.0ENSEWQP00005014822.1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75569at6073Duplicated511.6289.0ENSEWQP00005031828.1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75569at6073Duplicated511.6289.0ENSEWQP00005031837.1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Duplicated755.8441.0ENSEWQP00005043322.1protein CBFA2T3-likeJBrowse
75574at6073Duplicated755.5441.0ENSEWQP00005043333.1protein CBFA2T3-likeJBrowse
75574at6073Duplicated755.5441.0ENSEWQP00005043342.1protein CBFA2T3-likeJBrowse
75587at6073Complete644.9378.0ENSEWQP00005030509.1nuclease EXOG, mitochondrialJBrowse
Go to page: of 271 pages
TOP