BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77606at6073Duplicated1355.9918.0XP_074608585.1ataxin-7-like protein 1JBrowse
77611at6073Complete229.2198.0XP_074617576.1protein FAM199X-likeJBrowse
77613at6073Duplicated1369.51016.0XP_074638566.1centrosomal protein of 95 kDa-likeJBrowse
77613at6073Duplicated1174.8999.0XP_074638568.1centrosomal protein of 95 kDa-likeJBrowse
77614at6073Complete282.1240.0XP_074630755.1spermatogenesis-associated protein 7JBrowse
77616at6073Complete579.7396.0XP_074627345.1protein TFG-likeJBrowse
77617at6073Complete1922.61315.0XP_074608365.1Methylcytosine dioxygenaseJBrowse
77628at6073Duplicated283.3232.0XP_074627315.1osteopetrosis-associated transmembrane protein 1JBrowse
77628at6073Duplicated282.0230.0XP_074627316.1osteopetrosis-associated transmembrane protein 1JBrowse
77638at6073Complete527.0414.0XP_074608060.1SUMO-specific isopeptidase USPL1-likeJBrowse
77639at6073Duplicated971.4725.0XP_074615585.1MICOS complex subunit MIC60JBrowse
77639at6073Duplicated966.2725.0XP_074615584.1MICOS complex subunit MIC60JBrowse
77646at6073Complete1293.81056.0XP_074611976.1centlein-likeJBrowse
77652at6073Duplicated600.9425.0XP_074631964.1ribosome biogenesis protein NOP53-likeJBrowse
77652at6073Duplicated600.7425.0XP_074631963.1ribosome biogenesis protein NOP53-likeJBrowse
77659at6073Complete1111.2744.0XP_074638847.1GRIP and coiled-coil domain-containing protein 1JBrowse
77662at6073Complete606.3443.0XP_074610564.1mRNA-decapping enzyme 1A-likeJBrowse
77664at6073Duplicated371.7200.0XP_074636753.1microcephalin-likeJBrowse
77664at6073Duplicated371.6200.0XP_074636750.1microcephalin-likeJBrowse
77664at6073Duplicated371.6200.0XP_074636752.1microcephalin-likeJBrowse
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