BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77665at6073Complete936.3653.0XP_074611787.1heterogeneous nuclear ribonucleoprotein U-likeJBrowse
77683at6073Complete531.8361.0XP_074621622.1male-specific lethal 3 homologJBrowse
77690at6073Duplicated387.5234.0XP_074608502.1AP-1 complex-associated regulatory proteinJBrowse
77690at6073Duplicated374.1234.0XP_074608503.1AP-1 complex-associated regulatory proteinJBrowse
77699at6073Duplicated1329.5968.0XP_074612011.1rho GTPase-activating protein 100F-likeJBrowse
77699at6073Duplicated1328.0967.0XP_074612012.1rho GTPase-activating protein 100F-likeJBrowse
77723at6073Complete527.8377.0XP_074636699.1microprocessor complex subunit DGCR8-likeJBrowse
77725at6073Complete275.7186.0XP_074638910.1RRP15-like proteinJBrowse
77731at6073Complete1028.9744.0XP_074615701.1uncharacterized protein LOC116304239JBrowse
77733at6073Complete804.4697.0XP_074622998.1KAT8 regulatory NSL complex subunit 1-likeJBrowse
77782at6073Duplicated309.6327.0XP_074612488.1plasminogen activator inhibitor 1 RNA-binding protein-likeJBrowse
77782at6073Duplicated282.8327.0XP_074612487.1plasminogen activator inhibitor 1 RNA-binding protein-likeJBrowse
77815at6073Complete668.1568.0XP_074617308.1Transcription factor TFIIIB component BJBrowse
77821at6073Duplicated253.0228.0XP_074616456.1Zinc finger CCHC domain-containing protein 7JBrowse
77821at6073Duplicated247.1227.0XP_074616455.1Zinc finger CCHC domain-containing protein 7JBrowse
77830at6073Complete1298.1992.0XP_074605979.1E3 ubiquitin-protein ligase RBBP6-likeJBrowse
77845at6073Complete244.2243.0XP_074606595.1syndecan-2JBrowse
77846at6073Duplicated413.6311.0XP_074605940.1Ubiquitin-associated protein 1JBrowse
77846at6073Duplicated413.6311.0XP_074605948.1Ubiquitin-associated protein 1JBrowse
77849at6073Duplicated622.2514.0XP_074626054.1protein transport protein Sec16A-likeJBrowse
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